FFCP PHASE1:Hg19::chr11:10590144..10590159,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14687 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z296 | |||
|association_with_transcript=-20bp_to_ENST00000529598_5end | |||
|coexpression_cluster_id=C2091 | |||
|description=CAGE_peak_3_at_LYVE1_5end | |||
|id=chr11:10590144..10590159,- | |||
|ontology_enrichment_celltype=CL:0000115!2.06e-17!35;CL:0002139!1.14e-15!24;CL:0002078!4.50e-12!44;CL:0000071!1.33e-10!18;CL:0002546!1.33e-10!18;CL:0000213!1.52e-07!57;CL:0000215!1.52e-07!57;CL:0005020!7.21e-07!6;CL:0002138!7.21e-07!6;CL:0005022!7.21e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.00e-12;36!CL:0002139;2.25e-11;24!CL:0000071;1.79e-09;18!CL:0002543;3.65e-07;6!CL:0002078;5.02e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.64e-15,36;CL:0002139,2.29e-11,24;CL:0002078,8.97e-11,45;CL:0000071,1.82e-09,18;CL:0002546,1.82e-09,18;CL:0002543,3.73e-07,6;CL:0000213,4.02e-07,58;CL:0000215,4.02e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.79e-09;18!UBERON:0004872;2.97e-09;7!UBERON:0006603;9.94e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.66e-62!115;UBERON:0004111!1.15e-24!241;UBERON:0001049!1.24e-24!57;UBERON:0005068!1.24e-24!57;UBERON:0006241!1.24e-24!57;UBERON:0007135!1.24e-24!57;UBERON:0000025!8.49e-23!194;UBERON:0000477!1.77e-22!286;UBERON:0002616!6.85e-22!59;UBERON:0003080!1.27e-18!42;UBERON:0003075!2.16e-18!86;UBERON:0007284!2.16e-18!86;UBERON:0002780!1.18e-17!41;UBERON:0001890!1.18e-17!41;UBERON:0006240!1.18e-17!41;UBERON:0000955!2.02e-17!69;UBERON:0006238!2.02e-17!69;UBERON:0001017!2.64e-17!82;UBERON:0002346!6.70e-17!90;UBERON:0005743!7.72e-17!86;UBERON:0002020!1.35e-15!34;UBERON:0003528!1.35e-15!34;UBERON:0001893!1.51e-15!34;UBERON:0002791!6.16e-15!33;UBERON:0001869!3.42e-14!32;UBERON:0000073!6.52e-14!94;UBERON:0001016!6.52e-14!94;UBERON:0000119!2.22e-13!312;UBERON:0000483!7.28e-13!309;UBERON:0002619!1.10e-11!22;UBERON:0003056!8.43e-11!61;UBERON:0001986!1.33e-10!18;UBERON:0004638!1.33e-10!18;UBERON:0004852!1.33e-10!18;UBERON:0001950!2.94e-10!20;UBERON:0000956!1.01e-09!25;UBERON:0000203!1.01e-09!25;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0000467!3.00e-09!625;UBERON:0000480!3.61e-09!626;UBERON:0000468!4.59e-09!659;UBERON:0000033!8.55e-09!123;UBERON:0000481!5.24e-08!347;UBERON:0000487!6.39e-08!22;UBERON:0002420!6.95e-08!9;UBERON:0007245!6.95e-08!9;UBERON:0010009!6.95e-08!9;UBERON:0010011!6.95e-08!9;UBERON:0000454!6.95e-08!9;UBERON:0002308!7.16e-08!9;UBERON:0000125!7.16e-08!9;UBERON:0002298!7.73e-08!8;UBERON:0003103!3.10e-07!69;UBERON:0003076!3.32e-07!15;UBERON:0003057!3.32e-07!15;UBERON:0000055!4.02e-07!69;UBERON:0004872!5.85e-07!84;UBERON:0001871!7.88e-07!7;UBERON:0002465!9.90e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.09e-12;114!UBERON:0004638;1.79e-09;18!UBERON:0001986;1.79e-09;18!UBERON:0004852;1.79e-09;18!UBERON:0000487;2.93e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.49e-47,114;UBERON:0004111,1.06e-11,240;UBERON:0000025,4.78e-11,192;UBERON:0004638,1.82e-09,18;UBERON:0001986,1.82e-09,18;UBERON:0004852,1.82e-09,18;UBERON:0003103,1.66e-07,68;UBERON:0000487,2.97e-07,22;UBERON:0003887,6.22e-07,12;UBERON:0004872,8.17e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,1.79007586580942,0.361439152384566,0,0.724232594804119,2.3858578411533,0.486634870302636,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0.79504962946682,2.58070378531837,0.694281003215189,0.56530794192401,4.19499436209906,0,0,44.4476825771246,45.1823153612122,19.7485161531155,15.3075140501476,92.7531968976585,15.6199716830828,6.25027236587977,0,21.6998339730314,11.0019392586823,5.40535106319947,0,4.74632829784064,5.1296488300514,0,0,0,0,0,0,0,0,0,0,0,0.933633106199299,0,0.326923806226917,0.151357427644931,1.15235184896,0,0,2.2818872861778,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,116.628561830694,12.6217596423101,0,0,0,0.982827216677626,10.0434284135839,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.80672114403045,0,0,1.690605505112,0,0,0.257207374262142,0,0,0.142977993658148,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6480060885076,41.5028640874698,22.0234234424182,6.16909010761157,0,0,0,0,0,0,0,0,0,0,11.4375522928972,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2031122924367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3236506943527,0,0,0,0,0,22.2692432493279,0,0,0,0,0,0,4.97073823883149,0.281338832821026,0,0,0,4.98119970627674,3.59169090190492,0,0,0,0,0,0,0,14.2046504117184,0,0,0,1.29875337426592,0,0,0,10.8749936315219,0,0,0,0,0,0,2.65722415744152,1.20596438625408,0,2.21158519862449,0.295547618953547,1.09692698576986,0,0,3.00106008164809,0,0,0,0,14.9930545074002,0,28.2508431289876,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5070405785476,9.16545217400438,0,0,0,1.21322039365219,9.63093176758547,0,0,0,0,1.97292201424695,9.67925728389311,0.30607276163049,28.623520571705,0,0,0,0,0,0,0,0,0,0,0,9.08578674858557,0,0,0,0,8.72901148395775,0,6.55344148263544,0,0,0.759729551470544,0,0,5.33632486848381,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,2.0535806833799,0,0,0,4.74780082162832,2.06244381610515,2.15361907373044,2.39614800598789,4.72148652950228,9.37320121255865,5.64341168888501,0,0,0.0787831823072236,0,0,0,0,1.59045937961861,1.90684768556206,0,0,0,0,0,0.546746009922222,0,9.53549058320298,9.70409880497465,0,0,0,5.00286728461357,11.2555634962123,0,0,0,0,0,0.410462603746695,0,0,16.4138501719452,3.97520666736664,0.646414781807753,1.98348902614035,0,0,18.6877971993466,76.715700888637,15.3268450478462,33.7392894832127,0,0,0,0,2.2562090462043,1.22538230705385,2.29510841496863,0,0.886068179966986,0.610131324509816,0.625954653532499,4.58727356552057,3.77158775225298,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.638535436228605,0.41023272848151,0.252071696221718,0.622415272177961,1.13032951942296,0,0,0,0,0,0,0,0,5.11430232774949,0,2.34454203369928,0,0,0,0.742913430802341,0,0,0.887821342714695,0,0.548257766857182,3.47347824872506,0,0,1.60710550763486,1.3451348888753,1.82089681270989,1.36597314810779,16.942152701064,0,0,0.40781839786099,0.328863867814245,0,0,6.75040598514421,0.314231179832004,0,6.39211104356647,0,0,3.28792103212619,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,3.23714418593947,7.69971051421853,5.799072156691,6.79995390282795,0,0,0,0,0,0,7.64024165268652,7.21246549663059,0,5.63841140033983,0,0.981542335574726,0.891139200981258,1.2679671827502,0.339854229375634,98.5891299608664,83.0217597099674,0,0,0,0,5.84269110597214,0,1.43339583151451,0,0.339957450954573,0.436350690340377,8.99345628876181,0,0.462175628631418,0,0,0,0,0,0,0,0,8.41143550222457,1.07185652062471,0,1.13776295448085,6.39701945702943,5.23741749220229,0,4.53145414359763,0,10.820016907288,7.27621880249589,3.26575121845442,7.87136592496146,2.02056159043763,10.6866086035088,6.98586748746628,0,0,0,0,7.03922827210363,2.2003459952916,4.47585796147312,4.66029741929859,17.7120938360103,0 | |||
|short_description=p3@LYVE1 | |||
}} |
Revision as of 06:35, 11 January 2014
Short description: | p3@LYVE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LYVE1_5end |
Coexpression cluster: | C2091_Hepatic_spleen_Endothelial_lung_lymph_adipose_acute |
Association with transcript: | -20bp_to_ENST00000529598_5end |
EntrezGene: | LYVE1 |
HGNC: | 14687 |
UniProt: | F2Z296 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.64e-15 | 36 |
endothelial cell of vascular tree | 2.29e-11 | 24 |
meso-epithelial cell | 8.97e-11 | 45 |
blood vessel endothelial cell | 1.82e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.82e-09 | 18 |
vein endothelial cell | 3.73e-07 | 6 |
lining cell | 4.02e-07 | 58 |
barrier cell | 4.02e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.49e-47 | 114 |
anatomical conduit | 1.06e-11 | 240 |
tube | 4.78e-11 | 192 |
blood vessel endothelium | 1.82e-09 | 18 |
endothelium | 1.82e-09 | 18 |
cardiovascular system endothelium | 1.82e-09 | 18 |
compound organ | 1.66e-07 | 68 |
simple squamous epithelium | 2.97e-07 | 22 |
intraembryonic coelom | 6.22e-07 | 12 |
splanchnic layer of lateral plate mesoderm | 8.17e-07 | 83 |