FFCP PHASE1:Hg19::chr11:62370454..62370468,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr11:62370454..62370468,- | |||
|id=chr11:62370454..62370468,- | |||
|ontology_enrichment_celltype=CL:0000349!2.46e-08!3;CL:0002577!2.46e-08!3;CL:0002541!3.42e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.47e-35;19!CL:0002577;8.04e-27;3!CL:0002536;8.43e-18;2!CL:0002537;6.37e-16;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.50e-35,19;CL:0002577,8.05e-27,3;CL:0002536,7.43e-18,2;CL:0002537,5.48e-16,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.86e-10;1!UBERON:0000358;1.06e-09;1!UBERON:0003124;1.91e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;6.31e-10;1!DOID:326;6.31e-10;1!DOID:3978;6.31e-10;1!DOID:3394;6.31e-10;1!DOID:5844;6.31e-10;1!DOID:1799;1.91e-09;1!DOID:10165;1.91e-09;1!DOID:1798;1.91e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,6.31e-10,1;DOID:326,6.31e-10,1;DOID:3978,6.31e-10,1;DOID:3394,6.31e-10,1;DOID:5844,6.31e-10,1;DOID:1799,1.62e-09,1;DOID:10165,1.62e-09,1;DOID:1798,1.62e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.61e-22!14;UBERON:0000158!2.61e-22!14;UBERON:0000478!7.26e-16!24;UBERON:0003124!7.60e-16!7;UBERON:0004923!2.26e-10!57;UBERON:0001987!2.37e-10!4;UBERON:0004340!2.37e-10!4;UBERON:0000305!1.03e-08!7;UBERON:0004871!1.51e-07!8;UBERON:0000476!3.42e-07!3;UBERON:0000920!3.42e-07!3;UBERON:0005795!8.78e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.22e-40;24!UBERON:0001987;1.77e-34;4!UBERON:0000305;4.52e-30;7!UBERON:0005631;9.58e-30;10!UBERON:0000158;9.58e-30;10!UBERON:0001723;3.47e-12;3!UBERON:0001033;3.47e-12;3!UBERON:0002372;6.31e-10;1!UBERON:0001961;6.31e-10;1!UBERON:0001744;6.31e-10;1!UBERON:0001042;6.31e-10;1!UBERON:0001735;6.31e-10;1!UBERON:0001052;3.58e-09;4!UBERON:0004907;1.66e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.27e-58,14;UBERON:0000158,1.27e-58,14;UBERON:0000478,1.24e-40,24;UBERON:0001987,2.29e-34,4;UBERON:0004340,2.29e-34,4;UBERON:0000305,3.45e-30,7;UBERON:0003124,5.26e-30,7;UBERON:0004871,2.06e-26,8;UBERON:0004923,2.67e-16,66;UBERON:0001723,3.99e-12,3;UBERON:0001033,3.99e-12,3;UBERON:0010056,3.99e-12,3;UBERON:0000995,6.04e-10,21;UBERON:0002372,6.88e-10,1;UBERON:0001961,6.88e-10,1;UBERON:0001744,6.88e-10,1;UBERON:0001735,6.88e-10,1;UBERON:0005795,1.74e-09,22;UBERON:0003975,1.74e-09,22;UBERON:0001052,4.23e-09,4;UBERON:0004175,2.53e-08,25;UBERON:0001042,3.92e-08,10;UBERON:0009145,3.92e-08,10;UBERON:0004907,1.89e-07,5;UBERON:0006562,1.95e-07,11 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,2.83973783769224,3.69273769519835,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,7.57818928615649,11.6504807657348,9.37409909322009,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,5.49112314896687,2.96964680832639,4.91457123358771,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.524759999977174,0,0.568967241427498,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.83654246567162,1.76985594558733,0,0,0.269272933229316,0.434589487688032,1.5950057986596,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.522355239482415,0,0,0,0,0,6.88622017067778,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,4.5926170114768,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,0,1.83807346058077,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83334686136996,0,0,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,1.1531308121143,0,0,0,0,0,0,0.235479278551542,0,2.80272163313789,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.27940389140589,0.23806443146374,0,0.0620747142958579,0,0,0,2.17716747896961,3.42233301085281,4.10847523388984,0.860666464712116,0,0,0,0,0,2.34640942403454,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr11:62370454..62370468,- | |||
}} |
Revision as of 08:09, 11 January 2014
Short description: | p@chr11:62370454..62370468, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62370454..62370468, - |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.50e-35 | 19 |
placental epithelial cell | 8.05e-27 | 3 |
amniotic epithelial cell | 7.43e-18 | 2 |
amnion mesenchymal stem cell | 5.48e-16 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.27e-58 | 14 |
membranous layer | 1.27e-58 | 14 |
extraembryonic structure | 1.24e-40 | 24 |
placenta | 2.29e-34 | 4 |
allantois | 2.29e-34 | 4 |
amnion | 3.45e-30 | 7 |
chorion | 5.26e-30 | 7 |
somatic layer of lateral plate mesoderm | 2.06e-26 | 8 |
organ component layer | 2.67e-16 | 66 |
tongue | 3.99e-12 | 3 |
gustatory system | 3.99e-12 | 3 |
future tongue | 3.99e-12 | 3 |
uterus | 6.04e-10 | 21 |
tonsil | 6.88e-10 | 1 |
mucosa-associated lymphoid tissue | 6.88e-10 | 1 |
lymphoid tissue | 6.88e-10 | 1 |
tonsillar ring | 6.88e-10 | 1 |
embryonic uterus | 1.74e-09 | 22 |
internal female genitalia | 1.74e-09 | 22 |
rectum | 4.23e-09 | 4 |
internal genitalia | 2.53e-08 | 25 |
chordate pharynx | 3.92e-08 | 10 |
pharyngeal region of foregut | 3.92e-08 | 10 |
lower digestive tract | 1.89e-07 | 5 |
pharynx | 1.95e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 6.31e-10 | 1 |
ischemia | 6.31e-10 | 1 |
extrinsic cardiomyopathy | 6.31e-10 | 1 |
myocardial ischemia | 6.31e-10 | 1 |
myocardial infarction | 6.31e-10 | 1 |
islet cell tumor | 1.62e-09 | 1 |
endocrine pancreas cancer | 1.62e-09 | 1 |
pancreatic endocrine carcinoma | 1.62e-09 | 1 |