FFCP PHASE1:Hg19::chr12:27849378..27849385,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387849 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33748 | |||
|TSSclassifier=not | |||
|UniProt=Q6BDI9 | |||
|association_with_transcript=-42bp_to_ENST00000310791,NM_001029874,uc001rig.1_5end | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_1_at_REP15_5end | |||
|id=chr12:27849378..27849385,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.53e-21;1!UBERON:0006242;8.53e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.15e-28!27;UBERON:0005409!2.99e-27!35;UBERON:0001155!1.17e-22!9;UBERON:0000059!1.33e-18!11;UBERON:0001154!8.58e-14!1;UBERON:0001153!8.58e-14!1;UBERON:0004921!2.51e-12!129;UBERON:0004185!2.51e-12!129;UBERON:0001007!6.68e-12!155;UBERON:0001555!6.68e-12!155;UBERON:0007026!6.68e-12!155;UBERON:0004119!8.77e-11!169;UBERON:0000925!8.77e-11!169;UBERON:0006595!8.77e-11!169;UBERON:0002108!3.22e-08!14;UBERON:0003127!2.40e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.71e-54;22!UBERON:0000160;1.71e-53;17!UBERON:0002108;1.89e-36;4!UBERON:0001155;2.13e-35;9!UBERON:0004921;2.61e-33;33!UBERON:0000059;4.55e-29;11!UBERON:0001154;8.53e-21;1!UBERON:0001153;8.53e-21;1!UBERON:0009854;8.53e-21;1!UBERON:0001555;2.47e-14;54!UBERON:0001007;2.14e-08;81!UBERON:0000922;5.01e-08;49!UBERON:0002114;5.73e-08;2!UBERON:0002110;8.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.52e-53,17;UBERON:0005409,3.13e-48,25;UBERON:0002108,1.78e-36,4;UBERON:0001155,1.95e-35,9;UBERON:0000059,4.23e-29,11;UBERON:0001154,7.72e-21,1;UBERON:0001153,7.72e-21,1;UBERON:0001045,7.72e-21,1;UBERON:0001007,1.43e-10,145;UBERON:0001555,1.43e-10,145;UBERON:0007026,1.43e-10,145;UBERON:0004921,2.47e-10,118;UBERON:0004119,1.54e-09,160;UBERON:0000925,1.54e-09,160;UBERON:0006595,1.54e-09,160;UBERON:0002114,5.54e-08,2;UBERON:0002110,8.29e-08,3;UBERON:0006242,8.29e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,4.77670848318032,15.8867837682743,0,0,0,0,0,0,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56633154998186,5.68254857310289,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92134555298607,0,0,0,0,0,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@REP15 | |||
}} |
Revision as of 12:48, 11 January 2014
Short description: | p1@REP15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_REP15_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -42bp_to_ENST00000310791, NM_001029874, uc001rig.1_5end |
EntrezGene: | REP15 |
HGNC: | 33748 |
UniProt: | Q6BDI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.52e-53 | 17 |
gastrointestinal system | 3.13e-48 | 25 |
small intestine | 1.78e-36 | 4 |
colon | 1.95e-35 | 9 |
large intestine | 4.23e-29 | 11 |
vermiform appendix | 7.72e-21 | 1 |
caecum | 7.72e-21 | 1 |
midgut | 7.72e-21 | 1 |
digestive system | 1.43e-10 | 145 |
digestive tract | 1.43e-10 | 145 |
primitive gut | 1.43e-10 | 145 |
subdivision of digestive tract | 2.47e-10 | 118 |
endoderm-derived structure | 1.54e-09 | 160 |
endoderm | 1.54e-09 | 160 |
presumptive endoderm | 1.54e-09 | 160 |
duodenum | 5.54e-08 | 2 |
gallbladder | 8.29e-08 | 3 |
gall bladder primordium | 8.29e-08 | 3 |