FFCP PHASE1:Hg19::chr12:29727591..29727616,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr12:29727591..29727616,- | |||
|id=chr12:29727591..29727616,- | |||
|ontology_enrichment_celltype=CL:0002057!3.88e-35!42;CL:0000860!1.83e-32!45;CL:0002194!3.07e-29!63;CL:0000576!3.07e-29!63;CL:0000040!3.07e-29!63;CL:0000559!3.07e-29!63;CL:0000766!3.15e-28!76;CL:0002009!3.51e-28!65;CL:0000839!8.54e-26!70;CL:0000557!2.34e-25!71;CL:0002393!6.00e-23!9;CL:0002397!6.00e-23!9;CL:0000763!1.07e-20!112;CL:0000049!1.07e-20!112;CL:0002087!2.22e-17!119;CL:0000738!1.05e-16!140;CL:0000037!8.77e-15!172;CL:0000566!8.77e-15!172;CL:0000875!1.93e-14!3;CL:0002396!1.93e-14!3;CL:0000988!1.36e-13!182;CL:0002031!1.63e-13!124;CL:0002032!3.76e-13!165;CL:0000837!3.76e-13!165;CL:0000767!9.37e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.28e-85;3!CL:0002396;2.28e-85;3!CL:0000767;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,2.28e-85,3;CL:0002396,2.28e-85,3;CL:0002393,1.02e-50,9;CL:0002397,1.02e-50,9;CL:0000860,2.33e-11,42;CL:0002057,2.33e-11,42;CL:0000767,1.09e-10,3;CL:0000766,4.57e-10,72;CL:0000473,5.35e-10,48;CL:0000234,5.35e-10,48;CL:0002194,4.37e-08,59;CL:0000576,4.37e-08,59;CL:0000040,4.37e-08,59;CL:0000559,4.37e-08,59;CL:0002009,7.72e-08,61;CL:0000839,2.77e-07,66;CL:0000557,3.50e-07,67;CL:0000763,8.01e-07,108;CL:0000049,8.01e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.48e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.62e-30!102;UBERON:0003061!7.62e-30!102;UBERON:0002193!1.46e-26!112;UBERON:0002371!6.53e-22!80;UBERON:0001474!5.18e-20!86;UBERON:0002405!2.46e-18!115;UBERON:0004765!3.00e-16!101;UBERON:0001434!3.00e-16!101;UBERON:0003081!1.90e-10!216;UBERON:0000178!8.95e-10!15;UBERON:0000179!8.95e-10!15;UBERON:0000463!8.95e-10!15;UBERON:0002204!1.18e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.75e-07,98;UBERON:0003061,1.75e-07,98;UBERON:0002193,8.11e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0.422510572623884,1.70083439972035,0.209658645508376,0,0,0,5.13022938734247,14.9187507899318,4.38393969035121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854299300541557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:29727591..29727616,- | |||
}} |
Revision as of 12:50, 11 January 2014
Short description: | p@chr12:29727591..29727616, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:29727591..29727616, - |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 2.28e-85 | 3 |
CD14-low, CD16-positive monocyte | 2.28e-85 | 3 |
intermediate monocyte | 1.02e-50 | 9 |
CD14-positive, CD16-positive monocyte | 1.02e-50 | 9 |
classical monocyte | 2.33e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-11 | 42 |
basophil | 1.09e-10 | 3 |
myeloid leukocyte | 4.57e-10 | 72 |
defensive cell | 5.35e-10 | 48 |
phagocyte | 5.35e-10 | 48 |
monopoietic cell | 4.37e-08 | 59 |
monocyte | 4.37e-08 | 59 |
monoblast | 4.37e-08 | 59 |
promonocyte | 4.37e-08 | 59 |
macrophage dendritic cell progenitor | 7.72e-08 | 61 |
myeloid lineage restricted progenitor cell | 2.77e-07 | 66 |
granulocyte monocyte progenitor cell | 3.50e-07 | 67 |
myeloid cell | 8.01e-07 | 108 |
common myeloid progenitor | 8.01e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.75e-07 | 98 |
blood island | 1.75e-07 | 98 |
hemolymphoid system | 8.11e-07 | 108 |