FFCP PHASE1:Hg19::chr12:57853565..57853579,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2735 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4317 | |||
|TSSclassifier=weak | |||
|UniProt=E9PIB9,F5H6H8,B4DNF7,P08151 | |||
|association_with_transcript=-338bp_to_ENST00000532291,ENST00000543426,NM_001160045,uc001snx.2,uc009zpp.2,uc009zpq.2_5end | |||
|description=CAGE_peak_1_at_GLI1_5end | |||
|id=chr12:57853565..57853579,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.68e-14!180;CL:0000057!3.20e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.93e-16;5!CL:0002321;1.13e-12;15!CL:0002363;2.51e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.78e-17,5;CL:0002363,2.66e-07,2;CL:0000008,2.66e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.51e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1115;9.14e-07;20 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;1.47e-07;4!UBERON:0003566;2.51e-07;2!UBERON:0001777;2.51e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,2.54e-07,4;UBERON:0003566,2.66e-07,2;UBERON:0001777,2.66e-07,2 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0.0764134057479513,0.246301768349837,0.157421562627358,0,0,0.309632246632152,0,0.30120591877825,0.739508020333575,1.47187681102573,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,1.09227722252426,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,0,0.954053754535364,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0.390178042679635,0,0,0.289803085735052,0,0.267540828089713,0,0.339928028092699,0,0,0,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0.511450247374121,0,0,0,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.458426764241994,0.728590576585084,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.549605231791222,0,0,0,0,0.12663051166458,0.132409180813219,1.43418310374407,0,0.560677600142307,1.06748995729705,0.49333509683432,0.311211035399766,0,0.163461903113459,0.454072282934794,0.576175924479999,2.81185718200556,0.624320153660641,0.570471821544449,0,0.23486899728753,0,0.421352420106746,0,0.122834317311768,0.619954687054593,0,0.247266929278557,0,0.718618141816238,0.841680569770331,0.875829639103749,0.277064115484183,0.438977620880838,0,0,0.680593098960126,0,0.213557388818567,0.635795703478686,0.900273288253207,0.618315175430633,1.03056216018252,0.37223371266318,0.843881661206331,0.389748020644795,0.757301322732344,0.184099797284599,0.484938170456436,0.710019185033229,0.906768884048762,0.339121184620975,0,0,0.573609190778008,2.80539524098069,2.78312513475119,2.78865462886844,1.7622379352613,2.77552935963191,1.82488679537915,0,0,0,0,0,0.354920400119532,0,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0.588664395376038,0,0,0,1.2347220339942,0,0,0.982827216677626,0,0.441463099414651,0,0.343135620597051,0.439001141634502,0,0.904760751704678,0.0925884451585296,1.3032332212413,2.07986957055916,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.925447434329912,0.600686115687835,0.571652865261156,1.34557301214433,0.43596006883328,0.2933531432838,0.258543431515556,0,0.845302752556,0.797814349754612,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0,0,0.358121926479791,0.560425719967636,0,0,0,0.254094624222463,0,0,0.670065061337395,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0.315404830067869,0.468565659970853,0.902838299183157,0,0,1.32845119707087,0.184369168541703,0.0868836144680828,1.56640925970192,0,0,0,0.106727557803444,0,1.66435439510497,0.604780586659361,0.248107807818777,1.07423381301644,0.280660094433074,0.512556597022804,0,0.965123526861645,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0.232420756919918,0.120859449591622,0.40101294060657,0.368323955743585,0.114814448164607,0.364182336013434,0.262248829918848,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.863663664408557,0,0.812839312631559,1.00337954770971,0,0,0,0,0,0,0,0,0,2.65551447973196,2.39277549769705,0,1.30012049207304,0,0.48335359146061,0.616194468458578,0.307007349452259,0.964856007391714,0.537101224341368,0.290033387828457,0.340906509664404,0.356128142586949,0,0.768760269460425,0,0,0.929691098594572,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0.571890581771475,1.02359116524534,0,0,0.78494864019923,0.179872457583315,0.823611089208164,0.353437207037059,0.404364963146632,0,0,0.975267478179181,0,0,0.409499734223957,0,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,0.143411352204052,0,1.07001315444375,1.06428319221179,0,0,0.379473173765715,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0.185803175125719,0.721346064882224,0.426851060090485,0.637705090915289,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,3.15537356548735,0.222886768554957,0,0,0,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0.511343412510774,0.123084805461069,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.227586896570999,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.442317039724898,0,0.219385397153973,0.10893846351899,0.278847488557207,0.307801034015188,0.341826167541004,0,0.0897576444097721,0.217294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| |||
|short_description=p1@GLI1 | |||
}} |
Revision as of 14:10, 11 January 2014
Short description: | p1@GLI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLI1_5end |
Coexpression cluster: | NA |
Association with transcript: | -338bp_to_ENST00000532291, ENST00000543426, NM_001160045, uc001snx.2, uc009zpp.2, uc009zpq.2_5end |
EntrezGene: | GLI1 |
HGNC: | 4317 |
UniProt: | E9PIB9F5H6H8B4DNF7P08151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.78e-17 | 5 |
keratocyte | 2.66e-07 | 2 |
migratory cranial neural crest cell | 2.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma | 2.54e-07 | 4 |
head connective tissue | 2.66e-07 | 2 |
substantia propria of cornea | 2.66e-07 | 2 |