FFCP PHASE1:Hg19::chr13:99330012..99330023,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_AK310205_5end | |||
|description=CAGE_peak_2_at_AK310205_5end | |||
|id=chr13:99330012..99330023,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.96e-27!7;CL:0000126!2.96e-27!7;CL:0000127!2.96e-27!7;CL:0002453!2.96e-27!7;CL:0000221!2.20e-16!71;CL:0002319!2.05e-15!25;CL:0002605!5.30e-13!3;CL:0002166!1.11e-12!3;CL:0002603!3.36e-12!3;CL:0002621!4.21e-12!3;CL:0000243!1.40e-10!15;CL:0000125!1.40e-10!15;CL:0000030!1.40e-10!15;CL:0000339!1.40e-10!15;CL:0002159!2.10e-10!13;CL:0000220!1.70e-09!246;CL:0002321!2.33e-09!248;CL:0000095!2.37e-09!17;CL:0000123!2.37e-09!17;CL:0000317!7.80e-09!2;CL:1000448!7.80e-09!2;CL:0002308!7.80e-09!2;CL:0002140!7.80e-09!2;CL:0000244!1.05e-08!4;CL:0000731!1.05e-08!4;CL:0002549!1.38e-08!2;CL:0002589!5.43e-08!2;CL:0000133!5.74e-08!59;CL:0000047!5.85e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.48e-34;7!CL:0000126;1.48e-34;7!CL:0000127;1.48e-34;7!CL:0002605;5.87e-30;3!CL:0000047;2.15e-20;2!CL:0000317;1.40e-19;2!CL:1000448;1.40e-19;2!CL:0002308;1.40e-19;2!CL:0002140;1.40e-19;2!CL:0002319;6.43e-17;25!CL:0002159;7.70e-17;14!CL:0000243;3.31e-14;15!CL:0000125;3.31e-14;15!CL:0002166;5.37e-14;3!CL:0000095;1.06e-12;17!CL:0000362;6.77e-10;9!CL:0002077;1.69e-08;34!CL:0000622;2.16e-08;5!CL:0000154;3.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.20e-34,7;CL:0000126,1.20e-34,7;CL:0000127,1.20e-34,7;CL:0002453,1.20e-34,7;CL:0002605,6.17e-30,3;CL:0000221,6.72e-20,72;CL:0000317,1.41e-19,2;CL:1000448,1.41e-19,2;CL:0002308,1.41e-19,2;CL:0002140,1.41e-19,2;CL:0002319,5.91e-17,25;CL:0002159,6.63e-17,14;CL:0000243,3.04e-14,15;CL:0000125,3.04e-14,15;CL:0000030,3.04e-14,15;CL:0000339,3.04e-14,15;CL:0002166,4.72e-14,3;CL:0000095,9.88e-13,17;CL:0000123,9.88e-13,17;CL:0000362,6.27e-10,9;CL:0002077,1.09e-09,34;CL:0000133,3.28e-09,59;CL:0000622,2.16e-08,5;CL:0002321,3.90e-07,250;CL:0000154,3.92e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000339;3.31e-14;15!CL:0000221;1.50e-09;72!CL:0000133;6.03e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;5.56e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.14e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000153!6.67e-13!129;UBERON:0007811!6.67e-13!129;UBERON:0000033!1.34e-12!123;UBERON:0004121!2.66e-12!169;UBERON:0001949!4.21e-12!3;UBERON:0000924!7.36e-12!173;UBERON:0006601!7.36e-12!173;UBERON:0001017!3.24e-10!82;UBERON:0001708!1.30e-09!4;UBERON:0001704!1.30e-09!4;UBERON:0005743!1.46e-09!86;UBERON:0002419!7.80e-09!2;UBERON:0007771!7.80e-09!2;UBERON:0003297!7.80e-09!2;UBERON:0001821!7.80e-09!2;UBERON:0003487!7.80e-09!2;UBERON:0001820!7.80e-09!2;UBERON:0005089!7.80e-09!2;UBERON:0005088!7.80e-09!2;UBERON:0003947!1.38e-08!2;UBERON:0005629!1.38e-08!2;UBERON:0005358!1.38e-08!2;UBERON:0001886!1.38e-08!2;UBERON:0004086!1.38e-08!2;UBERON:0005282!1.38e-08!2;UBERON:0005281!1.38e-08!2;UBERON:0002200!2.03e-08!11;UBERON:0006876!2.03e-08!11;UBERON:0000073!2.70e-08!94;UBERON:0001016!2.70e-08!94;UBERON:0001529!5.43e-08!2;UBERON:0007204!5.43e-08!2;UBERON:0004733!1.61e-07!12;UBERON:0002028!1.61e-07!12;UBERON:0007277!1.61e-07!12;UBERON:0005284!3.05e-07!5;UBERON:0000365!4.79e-07!5;UBERON:0004732!6.48e-07!13;UBERON:0002680!9.00e-07!9;UBERON:0001895!9.00e-07!9;UBERON:0010092!9.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.40e-19;2!UBERON:0007771;1.40e-19;2!UBERON:0003297;1.40e-19;2!UBERON:0001821;1.40e-19;2!UBERON:0003487;1.40e-19;2!UBERON:0001820;1.40e-19;2!UBERON:0001708;9.99e-11;4!UBERON:0008895;9.99e-11;4!UBERON:0010371;1.64e-10;31!UBERON:0011159;9.36e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.41e-19,2;UBERON:0007771,1.41e-19,2;UBERON:0003297,1.41e-19,2;UBERON:0001821,1.41e-19,2;UBERON:0003487,1.41e-19,2;UBERON:0001820,1.41e-19,2;UBERON:0005089,1.41e-19,2;UBERON:0005088,1.41e-19,2;UBERON:0001708,9.07e-11,4;UBERON:0008895,9.07e-11,4;UBERON:0011159,8.67e-09,5;UBERON:0004121,1.85e-08,171;UBERON:0000924,1.85e-08,171;UBERON:0006601,1.85e-08,171;UBERON:0010371,1.49e-07,104;UBERON:0010188,1.84e-07,6;UBERON:0002539,1.84e-07,6;UBERON:0008816,1.84e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984968464614303,0.816002764977012,1.56727360739044,3.43483184557268,6.02247470320691,5.39833350257652,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3858578411533,0,2.6469748805939,0,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,1.21085942115945,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,0,0,0.185176890317059,0,0,0,1.04337364477569,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,7.72717789714754,2.97727704209012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59008173289419,2.60279707715243,0.773288812777695,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.255225424989168,0,0,0,0,0,0,0,0.55597265731176,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7266902803103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,2.40780445460263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20192129160065,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@AK310205 | |||
}} |
Revision as of 18:23, 11 January 2014
Short description: | p2@AK310205 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK310205_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_AK310205_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.20e-34 | 7 |
macroglial cell | 1.20e-34 | 7 |
astrocyte | 1.20e-34 | 7 |
oligodendrocyte precursor cell | 1.20e-34 | 7 |
astrocyte of the cerebral cortex | 6.17e-30 | 3 |
ectodermal cell | 6.72e-20 | 72 |
sebum secreting cell | 1.41e-19 | 2 |
epithelial cell of sweat gland | 1.41e-19 | 2 |
epithelial cell of skin gland | 1.41e-19 | 2 |
acinar cell of sebaceous gland | 1.41e-19 | 2 |
neural cell | 5.91e-17 | 25 |
general ecto-epithelial cell | 6.63e-17 | 14 |
glial cell (sensu Vertebrata) | 3.04e-14 | 15 |
glial cell | 3.04e-14 | 15 |
glioblast | 3.04e-14 | 15 |
glioblast (sensu Vertebrata) | 3.04e-14 | 15 |
epithelial cell of Malassez | 4.72e-14 | 3 |
neuron associated cell | 9.88e-13 | 17 |
neuron associated cell (sensu Vertebrata) | 9.88e-13 | 17 |
epidermal cell | 6.27e-10 | 9 |
ecto-epithelial cell | 1.09e-09 | 34 |
neurectodermal cell | 3.28e-09 | 59 |
acinar cell | 2.16e-08 | 5 |
embryonic cell | 3.90e-07 | 250 |
protein secreting cell | 3.92e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.41e-19 | 2 |
epidermis gland | 1.41e-19 | 2 |
gland of integumental system | 1.41e-19 | 2 |
sebaceous gland | 1.41e-19 | 2 |
skin sebaceous gland | 1.41e-19 | 2 |
sweat gland | 1.41e-19 | 2 |
sweat gland placode | 1.41e-19 | 2 |
sebaceous gland placode | 1.41e-19 | 2 |
jaw skeleton | 9.07e-11 | 4 |
splanchnocranium | 9.07e-11 | 4 |
primary subdivision of cranial skeletal system | 8.67e-09 | 5 |
ectoderm-derived structure | 1.85e-08 | 171 |
ectoderm | 1.85e-08 | 171 |
presumptive ectoderm | 1.85e-08 | 171 |
ecto-epithelium | 1.49e-07 | 104 |
protuberance | 1.84e-07 | 6 |
pharyngeal arch | 1.84e-07 | 6 |
embryonic head | 1.84e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.14e-11 | 1 |