FFCP PHASE1:Hg19::chr14:71787138..71787201,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20284 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000553453,ENST00000554126,ENST00000554362,ENST00000555989,ENST00000556408,ENST00000556780_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_SIPA1L1_5end | |||
|id=chr14:71787138..71787201,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.53e-28!140;CL:0000860!4.71e-27!45;CL:0002057!1.53e-26!42;CL:0002087!6.63e-20!119;CL:0002031!8.69e-20!124;CL:0000766!1.11e-17!76;CL:0000557!1.59e-15!71;CL:0000037!1.29e-13!172;CL:0000566!1.29e-13!172;CL:0002009!1.96e-13!65;CL:0000839!1.55e-12!70;CL:0002194!1.59e-12!63;CL:0000576!1.59e-12!63;CL:0000040!1.59e-12!63;CL:0000559!1.59e-12!63;CL:0002032!5.77e-12!165;CL:0000837!5.77e-12!165;CL:0000988!7.75e-11!182;CL:0000838!5.13e-07!52;CL:0000542!6.81e-07!53;CL:0000051!6.81e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.05e-20;33!CL:0002057;5.05e-20;33!CL:0000576;9.27e-12;48!CL:0000473;7.64e-11;39!CL:0000234;7.64e-11;39!CL:0000766;2.12e-09;69!CL:0002087;7.90e-08;104!CL:0000738;7.39e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.53e-26,42;CL:0002057,1.53e-26,42;CL:0000738,1.90e-26,136;CL:0002087,1.12e-18,115;CL:0002031,1.45e-18,120;CL:0000473,1.56e-18,48;CL:0000234,1.56e-18,48;CL:0000766,1.92e-16,72;CL:0000557,2.57e-14,67;CL:0000037,1.30e-12,168;CL:0002009,2.95e-12,61;CL:0000839,2.15e-11,66;CL:0002194,2.30e-11,59;CL:0000576,2.30e-11,59;CL:0000040,2.30e-11,59;CL:0000559,2.30e-11,59;CL:0002032,5.17e-11,161;CL:0000837,5.17e-11,161;CL:0000988,3.39e-10,177;CL:0000838,5.13e-07,52;CL:0000542,6.81e-07,53;CL:0000051,6.81e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-19;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.14e-17!102;UBERON:0003061!4.14e-17!102;UBERON:0001474!6.77e-14!86;UBERON:0002371!1.06e-12!80;UBERON:0002193!3.11e-12!112;UBERON:0004765!5.92e-12!101;UBERON:0001434!5.92e-12!101;UBERON:0002204!2.64e-09!167;UBERON:0002405!1.99e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.45e-16,98;UBERON:0003061,6.45e-16,98;UBERON:0001474,9.41e-13,82;UBERON:0002371,1.41e-11,76;UBERON:0002193,3.41e-11,108;UBERON:0004765,5.97e-11,90;UBERON:0001434,1.13e-09,100;UBERON:0002405,1.23e-08,93;UBERON:0002204,1.81e-07,167;UBERON:0003081,4.38e-07,203 | |||
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| |||
|short_description=p1@SIPA1L1 | |||
}} |
Revision as of 20:52, 11 January 2014
Short description: | p1@SIPA1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIPA1L1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000553453, ENST00000554126, ENST00000554362, ENST00000555989, ENST00000556408, ENST00000556780_5end |
EntrezGene: | SIPA1L1 |
HGNC: | 20284 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.53e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-26 | 42 |
leukocyte | 1.90e-26 | 136 |
nongranular leukocyte | 1.12e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.45e-18 | 120 |
defensive cell | 1.56e-18 | 48 |
phagocyte | 1.56e-18 | 48 |
myeloid leukocyte | 1.92e-16 | 72 |
granulocyte monocyte progenitor cell | 2.57e-14 | 67 |
hematopoietic stem cell | 1.30e-12 | 168 |
macrophage dendritic cell progenitor | 2.95e-12 | 61 |
myeloid lineage restricted progenitor cell | 2.15e-11 | 66 |
monopoietic cell | 2.30e-11 | 59 |
monocyte | 2.30e-11 | 59 |
monoblast | 2.30e-11 | 59 |
promonocyte | 2.30e-11 | 59 |
hematopoietic oligopotent progenitor cell | 5.17e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.17e-11 | 161 |
hematopoietic cell | 3.39e-10 | 177 |
lymphoid lineage restricted progenitor cell | 5.13e-07 | 52 |
lymphocyte | 6.81e-07 | 53 |
common lymphoid progenitor | 6.81e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.45e-16 | 98 |
blood island | 6.45e-16 | 98 |
bone element | 9.41e-13 | 82 |
bone marrow | 1.41e-11 | 76 |
hemolymphoid system | 3.41e-11 | 108 |
skeletal element | 5.97e-11 | 90 |
skeletal system | 1.13e-09 | 100 |
immune system | 1.23e-08 | 93 |
musculoskeletal system | 1.81e-07 | 167 |
lateral plate mesoderm | 4.38e-07 | 203 |