FFCP PHASE1:Hg19::chr14:88940316..88940324,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9651 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENST00000557249_5end | |||
|description=CAGE_peak_15_at_PTPN21_5end | |||
|id=chr14:88940316..88940324,- | |||
|ontology_enrichment_celltype=CL:0002541!5.34e-18!3;CL:0002537!1.96e-11!5;CL:0000039!4.76e-08!7;CL:0000586!4.76e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.45e-21;3!CL:0002537;2.37e-13;5!CL:0000349;3.48e-13;19!CL:0002097;3.57e-09;2!CL:0001014;4.52e-09;2!CL:0001016;4.52e-09;2!CL:0000150;8.74e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.02e-21,3;CL:0002537,2.68e-13,5;CL:0000349,3.59e-13,19;CL:0002097,3.71e-09,2;CL:0001014,4.34e-09,2;CL:0001016,4.34e-09,2;CL:0000150,8.60e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.11e-17;1 | |||
|ontology_enrichment_disease=DOID:178!2.67e-07!1;DOID:326!2.67e-07!1;DOID:3978!2.67e-07!1;DOID:3394!2.67e-07!1;DOID:5844!2.67e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:178;1.93e-16;1!DOID:326;1.93e-16;1!DOID:3978;1.93e-16;1!DOID:3394;1.93e-16;1!DOID:5844;1.93e-16;1!DOID:114;6.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.25e-16,1;DOID:326,2.25e-16,1;DOID:3978,2.25e-16,1;DOID:3394,2.25e-16,1;DOID:5844,2.25e-16,1;DOID:114,7.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.93e-20!14;UBERON:0000158!5.93e-20!14;UBERON:0000476!5.34e-18!3;UBERON:0000920!5.34e-18!3;UBERON:0003124!1.09e-13!7;UBERON:0000478!2.90e-11!24;UBERON:0004923!3.13e-10!57;UBERON:0000305!2.72e-08!7;UBERON:0004871!2.63e-07!8;UBERON:0000989!3.60e-07!1;UBERON:0008811!3.60e-07!1;UBERON:0006258!3.60e-07!1;UBERON:0005876!3.60e-07!1;UBERON:0004874!3.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.04e-24;10!UBERON:0000158;1.04e-24;10!UBERON:0003124;4.45e-21;3!UBERON:0000920;4.45e-21;3!UBERON:0000478;5.06e-16;24!UBERON:0000305;8.34e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.31e-27,14;UBERON:0000158,2.31e-27,14;UBERON:0000920,4.02e-21,3;UBERON:0003124,2.64e-20,7;UBERON:0000478,5.15e-16,24;UBERON:0000305,9.11e-10,7;UBERON:0004871,1.17e-08,8 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0.593929361665277,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,2.42345639906385,0.325942115766024,1.5950057986596,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50327341887344,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,4.61252324845722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.535928260312357,0,0,0,0,0,0,0,0.190941474834495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@PTPN21 | |||
}} |
Revision as of 21:23, 11 January 2014
Short description: | p15@PTPN21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PTPN21_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000557249_5end |
EntrezGene: | PTPN21 |
HGNC: | 9651 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.02e-21 | 3 |
amnion mesenchymal stem cell | 2.68e-13 | 5 |
extraembryonic cell | 3.59e-13 | 19 |
cortical cell of adrenal gland | 3.71e-09 | 2 |
CD1a-positive Langerhans cell | 4.34e-09 | 2 |
immature CD1a-positive Langerhans cell | 4.34e-09 | 2 |
glandular epithelial cell | 8.60e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.31e-27 | 14 |
membranous layer | 2.31e-27 | 14 |
egg chorion | 4.02e-21 | 3 |
chorion | 2.64e-20 | 7 |
extraembryonic structure | 5.15e-16 | 24 |
amnion | 9.11e-10 | 7 |
somatic layer of lateral plate mesoderm | 1.17e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.25e-16 | 1 |
ischemia | 2.25e-16 | 1 |
extrinsic cardiomyopathy | 2.25e-16 | 1 |
myocardial ischemia | 2.25e-16 | 1 |
myocardial infarction | 2.25e-16 | 1 |
heart disease | 7.49e-09 | 2 |