FFCP PHASE1:Hg19::chr15:33023745..33023757,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26585 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2001 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-380bp_to_AL359060_5end | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_11_at_GREM1_5end | |||
|id=chr15:33023745..33023757,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-24!180;CL:0000057!2.54e-23!75;CL:0002620!7.52e-17!23;CL:0002334!3.15e-14!12;CL:0000048!1.02e-13!430;CL:0000723!4.78e-13!436;CL:0000034!1.27e-12!444;CL:0002320!4.25e-09!365;CL:0000680!1.28e-08!57;CL:0000056!1.28e-08!57;CL:0000355!1.28e-08!57;CL:0002371!1.84e-08!591;CL:0000192!3.06e-08!42;CL:0000514!3.06e-08!42;CL:0000144!6.15e-08!625;CL:0000134!8.50e-08!358;CL:0000187!6.26e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.07e-21;12!CL:0002620;2.06e-18;23!CL:0000499;5.84e-09;28!CL:0002559;1.24e-08;5!CL:0000135;2.05e-08;3!CL:0000388;2.05e-08;3!CL:0002539;2.79e-08;10!CL:0000057;6.60e-08;73!CL:0002580;1.73e-07;3!CL:0002579;1.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.95e-27,76;CL:0002334,6.72e-21,12;CL:0002620,3.00e-18,23;CL:0000048,1.45e-12,427;CL:0000723,3.88e-12,433;CL:0000034,1.38e-11,441;CL:0002320,9.32e-11,361;CL:0000134,4.11e-10,354;CL:0000499,5.92e-09,28;CL:0002559,1.23e-08,5;CL:0000135,1.96e-08,3;CL:0000388,1.96e-08,3;CL:0002539,2.94e-08,10;CL:0000219,6.34e-08,386;CL:0002580,1.09e-07,3;CL:0002579,2.10e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.18e-10!14;DOID:17!5.20e-07!5;DOID:450!5.20e-07!5;DOID:66!5.20e-07!5;DOID:423!5.20e-07!5;DOID:0080000!5.20e-07!5;DOID:11722!5.20e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.66e-11;5!DOID:450;1.66e-11;5!DOID:66;1.66e-11;5!DOID:423;1.66e-11;5!DOID:0080000;1.66e-11;5!DOID:11722;1.66e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.93e-11,5;DOID:450,1.93e-11,5;DOID:66,1.93e-11,5;DOID:423,1.93e-11,5;DOID:0080000,1.93e-11,5;DOID:11722,1.93e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!4.17e-14!45;UBERON:0002416!4.17e-14!45;UBERON:0002097!4.43e-14!40;UBERON:0000914!8.59e-14!83;UBERON:0002329!8.59e-14!83;UBERON:0003077!8.59e-14!83;UBERON:0003059!8.59e-14!83;UBERON:0007282!8.59e-14!83;UBERON:0009618!8.59e-14!83;UBERON:0007285!8.59e-14!83;UBERON:0003102!2.65e-11!95;UBERON:0004290!1.03e-10!70;UBERON:0000486!8.04e-10!82;UBERON:0000475!5.32e-09!365;UBERON:0002384!5.49e-09!375;UBERON:0005256!1.17e-08!143;UBERON:0003688!9.78e-08!6;UBERON:0002358!9.78e-08!6;UBERON:0003684!9.78e-08!6;UBERON:0001178!9.78e-08!6;UBERON:0001134!1.50e-07!61;UBERON:0002036!1.50e-07!61;UBERON:0003082!1.50e-07!61;UBERON:0002385!4.49e-07!63;UBERON:0001015!4.49e-07!63;UBERON:0000383!4.49e-07!63;UBERON:0004457!5.24e-07!12;UBERON:0000042!5.24e-07!12;UBERON:0000992!5.37e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.41e-13;41!UBERON:0002199;4.74e-12;46!UBERON:0002416;4.74e-12;46!UBERON:0004457;3.27e-11;9!UBERON:0000042;3.27e-11;9!UBERON:0003688;2.00e-09;6!UBERON:0002358;2.00e-09;6!UBERON:0003684;2.00e-09;6!UBERON:0001178;2.00e-09;6!UBERON:0003102;2.44e-09;50!UBERON:0002073;1.24e-08;5!UBERON:0007846;2.05e-08;3!UBERON:0000043;2.05e-08;3!UBERON:0007845;2.05e-08;3!UBERON:0004237;2.79e-08;10!UBERON:0004695;2.79e-08;10!UBERON:0002111;2.79e-08;10!UBERON:0004178;2.79e-08;10!UBERON:0002384;5.61e-07;198!UBERON:0001135;7.68e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.01e-18,46;UBERON:0002416,3.01e-18,46;UBERON:0002097,3.14e-17,41;UBERON:0002384,1.08e-10,371;UBERON:0003102,1.54e-10,99;UBERON:0003688,1.94e-09,6;UBERON:0002358,1.94e-09,6;UBERON:0003684,1.94e-09,6;UBERON:0001178,1.94e-09,6;UBERON:0002073,1.23e-08,5;UBERON:0005086,1.23e-08,5;UBERON:0007846,1.96e-08,3;UBERON:0000043,1.96e-08,3;UBERON:0007845,1.96e-08,3;UBERON:0004237,2.94e-08,10;UBERON:0004695,2.94e-08,10;UBERON:0002111,2.94e-08,10;UBERON:0004178,2.94e-08,10;UBERON:0004457,3.04e-08,12;UBERON:0000042,3.04e-08,12;UBERON:0001135,7.67e-07,15 | |||
|phase1_expression=2.18014055124668,7.27941781229343,0.704772020479856,6.00439790118782,1.78784437770915,6.10636966870258,0,0,0,0,0,0,0,0.37129905888014,1.65698687863958,11.4295274896802,6.62963980826375,6.57279081348636,8.29485757943862,0.123121058076788,0,0,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00535164254356,0.289693037921647,1.5905718941022,3.89307896242109,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0.12663051166458,0.662045904066094,1.72101972449288,1.41867352879343,0,0,0.74000264525148,0,0,0,0,0,0,1.24864030732128,0,0.747243402759005,0.352303495931295,0.161872944368132,0.280901613404497,0.408308342509787,0.122834317311768,0,0,8.65434252474949,0,0,0,0.250237039743928,0,0.877955241761676,11.9530240361618,3.90618953157152,0,3.40840307808838,1.2813443329114,3.17897851739343,5.10154863343484,2.88547081867629,1.28820270022815,2.04728541964749,1.18143432568886,4.38466523225394,3.5340728394176,1.74894807420369,0.484938170456436,5.32514388774922,3.42557133973977,2.54340888465731,0,0,0,0,0,0,0,0.252320850875628,0,10.9514672630871,18.6539872075937,0,4.64367928031979,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0.845302752556,1.59562869950922,2.08014873822732,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0.791951872933429,0,1.74306691720059,0,0,0,0,0,0,0,1.59259437334337,1.84928690295345,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,1.87173775377726,13.7390321373815,7.7274183366628,1.7571212248907,0,0,0,0.664225598535437,0,1.21637060255316,0,0,0,0,0,0,0,0,2.48107807818777,1.99500565274481,6.45518217196069,2.56278298511402,1.02341449813341,6.91671860917512,4.45254199334973,4.00945203886904,1.42049380250502,0.9033987161519,3.63478100428535,1.74315567689939,0,0,0,0.34444334449382,1.45672934405374,2.09799063935079,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,4.82051789532479,0,0,0,0.551346289938122,0,0,0.255679882248303,0.178064071293475,0,0,0,0,1.39453664789186,2.20368642781448,0,0,0,0,0.55597265731176,0.143124886741991,0.372158369359667,0,0.762520775695299,0.255897791311334,0,0,0,0.719489830333259,0.274537029736055,1.64937363283961,0,0,0.421258456238981,0,0.731140468893853,2.11300293513511,0.136499911407986,0.565621727814851,0,0,0,0,0,0,1.01455188481352,0.92947049429925,0,0,0,0.7133421029625,0.709522128141196,1.89996871767898,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0435146396035,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,5.04419836959365,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0.378806010550178,0.50313580350515,1.77962244319307,1.14420034198462,0.907385542579434,0.621748802331122,2.80924784980304,0.796483835818512,0.449803112163605,0.465788870628778,0.829412415681711,6.38020114939188,3.1304703708704,0.450772826991655,0,0.813741466409323,8.18318966411517,0.537052785212442,5.10437135866343,1.59238355479446,2.00013882331577,1.37358282073117,2.02049693259551,0,0,0,1.04397716786085,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.76337971845342,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,2.20905249094162,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,15.2517957448368,4.15958065768276,6.92202499398063,0.126166424835079,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@GREM1 | |||
}} |
Revision as of 22:40, 11 January 2014
Short description: | p11@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | -380bp_to_AL359060_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.95e-27 | 76 |
preadipocyte | 6.72e-21 | 12 |
skin fibroblast | 3.00e-18 | 23 |
multi fate stem cell | 1.45e-12 | 427 |
somatic stem cell | 3.88e-12 | 433 |
stem cell | 1.38e-11 | 441 |
connective tissue cell | 9.32e-11 | 361 |
mesenchymal cell | 4.11e-10 | 354 |
stromal cell | 5.92e-09 | 28 |
hair follicle cell | 1.23e-08 | 5 |
fibrocyte | 1.96e-08 | 3 |
tendon cell | 1.96e-08 | 3 |
aortic smooth muscle cell | 2.94e-08 | 10 |
motile cell | 6.34e-08 | 386 |
preadipocyte of the breast | 1.09e-07 | 3 |
omentum preadipocyte | 2.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 3.01e-18 | 46 |
integumental system | 3.01e-18 | 46 |
skin of body | 3.14e-17 | 41 |
connective tissue | 1.08e-10 | 371 |
surface structure | 1.54e-10 | 99 |
omentum | 1.94e-09 | 6 |
peritoneum | 1.94e-09 | 6 |
abdominal cavity | 1.94e-09 | 6 |
visceral peritoneum | 1.94e-09 | 6 |
hair follicle | 1.23e-08 | 5 |
hair follicle placode | 1.23e-08 | 5 |
dense regular connective tissue | 1.96e-08 | 3 |
tendon | 1.96e-08 | 3 |
regular connective tissue | 1.96e-08 | 3 |
blood vessel smooth muscle | 2.94e-08 | 10 |
arterial system smooth muscle | 2.94e-08 | 10 |
artery smooth muscle tissue | 2.94e-08 | 10 |
aorta smooth muscle tissue | 2.94e-08 | 10 |
cavity lining | 3.04e-08 | 12 |
serous membrane | 3.04e-08 | 12 |
smooth muscle tissue | 7.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.93e-11 | 5 |
myotonic disease | 1.93e-11 | 5 |
muscle tissue disease | 1.93e-11 | 5 |
myopathy | 1.93e-11 | 5 |
muscular disease | 1.93e-11 | 5 |
myotonic dystrophy | 1.93e-11 | 5 |