FFCP PHASE1:Hg19::chr16:2106134..2106163,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=7249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12363 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000467949_5end | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_18_at_TSC2_5end | |||
|id=chr16:2106134..2106163,+ | |||
|ontology_enrichment_celltype=CL:0000313!1.65e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.42e-195;1!CL:0000159;1.55e-98;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.42e-195,1;CL:0000159,1.55e-98,2;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |||
|ontology_enrichment_disease=DOID:2152!1.65e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.42e-195;1!DOID:2394;1.43e-15;14!DOID:299;2.15e-09;25!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.42e-195,1;DOID:2394,1.43e-15,14;DOID:299,2.15e-09,25;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002021!1.92e-12!5;UBERON:0001049!9.86e-12!57;UBERON:0005068!9.86e-12!57;UBERON:0006241!9.86e-12!57;UBERON:0007135!9.86e-12!57;UBERON:0002616!2.81e-11!59;UBERON:0001950!7.27e-11!20;UBERON:0007023!5.98e-10!115;UBERON:0002619!7.10e-10!22;UBERON:0002346!9.82e-10!90;UBERON:0000988!1.07e-09!3;UBERON:0000955!3.11e-09!69;UBERON:0006238!3.11e-09!69;UBERON:0004733!7.22e-09!12;UBERON:0002028!7.22e-09!12;UBERON:0007277!7.22e-09!12;UBERON:0000956!1.12e-08!25;UBERON:0000203!1.12e-08!25;UBERON:0003075!1.27e-08!86;UBERON:0007284!1.27e-08!86;UBERON:0004911!1.65e-08!1;UBERON:0005743!1.68e-08!86;UBERON:0002020!1.75e-08!34;UBERON:0003528!1.75e-08!34;UBERON:0004732!3.40e-08!13;UBERON:0003112!6.19e-08!1;UBERON:0000032!6.19e-08!1;UBERON:0005253!6.19e-08!1;UBERON:0003128!6.19e-08!1;UBERON:0002241!6.19e-08!1;UBERON:0001703!6.19e-08!1;UBERON:0004761!6.19e-08!1;UBERON:0009617!6.19e-08!1;UBERON:0002298!6.73e-08!8;UBERON:0002022!8.69e-08!1;UBERON:0002902!1.14e-07!1;UBERON:0009899!1.14e-07!1;UBERON:0000073!1.62e-07!94;UBERON:0001016!1.62e-07!94;UBERON:0001017!1.64e-07!82;UBERON:0003076!4.06e-07!15;UBERON:0003057!4.06e-07!15;UBERON:0002680!4.72e-07!9;UBERON:0001895!4.72e-07!9;UBERON:0010092!4.72e-07!9;UBERON:0002780!6.42e-07!41;UBERON:0001890!6.42e-07!41;UBERON:0006240!6.42e-07!41;UBERON:0003080!9.71e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.42e-195;1!UBERON:0004909;1.55e-98;2!UBERON:0000992;1.21e-16;13!UBERON:0000991;6.74e-11;21!UBERON:0000474;2.32e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.42e-195,1;UBERON:0004909,1.55e-98,2;UBERON:0000992,1.21e-16,13;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0.157723490002507,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46751838573156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.803892390468535,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@TSC2 | |||
}} |
Revision as of 01:51, 12 January 2014
Short description: | p18@TSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_TSC2_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 0bp_to_ENST00000467949_5end |
EntrezGene: | TSC2 |
HGNC: | 12363 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.42e-195 | 1 |
seromucus secreting cell | 1.55e-98 | 2 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 5.42e-195 | 1 |
epithelium of gonad | 1.55e-98 | 2 |
female gonad | 1.21e-16 | 13 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.42e-195 | 1 |
ovarian cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |