FFCP PHASE1:Hg19::chr16:71123774..71123782,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:71123774..71123782,+ | |||
|id=chr16:71123774..71123782,+ | |||
|ontology_enrichment_celltype=CL:0000864!2.19e-08!1;CL:0000091!2.19e-08!1;CL:0000946!9.29e-08!1;CL:0000786!9.29e-08!1;CL:0000980!9.29e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.44e-23;5!CL:0000349;3.46e-14;19!CL:0000134;3.02e-12;55!CL:0002541;6.73e-11;3!CL:0000632;1.09e-10;3!CL:0000048;1.34e-09;58!CL:0000034;6.58e-09;69!CL:0000723;1.29e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.61e-23,5;CL:0000349,3.62e-14,19;CL:0002541,6.73e-11,3;CL:0000632,9.90e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.00e-12!14;DOID:120!1.58e-11!27;DOID:193!1.13e-10!29;DOID:3571!2.19e-08!1;DOID:4235!6.63e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3571;3.16e-29;1!DOID:3350;2.37e-15;2!DOID:120;3.81e-10;27!DOID:193;1.71e-09;29!DOID:2394;4.56e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.37e-29,1;DOID:3350,2.05e-15,2;DOID:120,3.81e-10,27;DOID:193,1.71e-09,29;DOID:2394,4.56e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002146!4.71e-08!1;UBERON:0005623!4.71e-08!1;UBERON:0002902!1.06e-07!1;UBERON:0009899!1.06e-07!1;UBERON:0002022!1.14e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.30e-26;10!UBERON:0000158;3.30e-26;10!UBERON:0000305;3.71e-17;7!UBERON:0000478;2.19e-11;24!UBERON:0003124;6.73e-11;3!UBERON:0000920;6.73e-11;3!UBERON:0002118;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.09e-19,14;UBERON:0000158,6.09e-19,14;UBERON:0000305,4.02e-17,7;UBERON:0004871,4.07e-15,8;UBERON:0000478,2.27e-11,24;UBERON:0000920,6.73e-11,3;UBERON:0002118,6.39e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64845291462176,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,9.52614971379368,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.797525143673985,3.65221543268214,0,0,0,0.181848659202559,0,0,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:71123774..71123782,+ | |||
}} |
Revision as of 12:09, 20 January 2014
Short description: | p@chr16:71123774..71123782, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:71123774..71123782, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.61e-23 | 5 |
extraembryonic cell | 3.62e-14 | 19 |
chorionic membrane mesenchymal stem cell | 6.73e-11 | 3 |
hepatic stellate cell | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.09e-19 | 14 |
membranous layer | 6.09e-19 | 14 |
amnion | 4.02e-17 | 7 |
somatic layer of lateral plate mesoderm | 4.07e-15 | 8 |
extraembryonic structure | 2.27e-11 | 24 |
egg chorion | 6.73e-11 | 3 |
right ovary | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.37e-29 | 1 |
mesenchymal cell neoplasm | 2.05e-15 | 2 |
female reproductive organ cancer | 3.81e-10 | 27 |
reproductive organ cancer | 1.71e-09 | 29 |
ovarian cancer | 4.56e-09 | 14 |