FFCP PHASE1:Hg19::chr16:84224757..84224776,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=161931 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30714 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000268624_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_ADAD2_5end | |||
|id=chr16:84224757..84224776,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.19e-32!7;CL:0000586!3.19e-32!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.02e-23;7!CL:0000586;2.02e-23;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.02e-23,7;CL:0000586,2.02e-23,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.53e-63;10!UBERON:0005564;2.53e-63;10!UBERON:0006603;2.20e-07;65 | |||
|ontology_enrichment_disease=DOID:3095!8.77e-11!22;DOID:2994!8.77e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.51e-08;22!DOID:2994;3.51e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.51e-08,22;DOID:2994,3.51e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.93e-77!8;UBERON:0003135!3.38e-56!11;UBERON:0000991!1.09e-29!21;UBERON:0009196!1.09e-29!21;UBERON:0009117!1.09e-29!21;UBERON:0005564!1.09e-29!21;UBERON:0004176!2.33e-28!22;UBERON:0003101!2.33e-28!22;UBERON:0000079!2.33e-28!22;UBERON:0001882!9.79e-26!1;UBERON:0005403!9.79e-26!1;UBERON:0002323!9.48e-14!46;UBERON:0003133!3.45e-13!48;UBERON:0004458!6.33e-13!49;UBERON:0005156!8.91e-11!59;UBERON:0000990!8.91e-11!59;UBERON:0003886!4.17e-10!63;UBERON:0002553!4.08e-09!70;UBERON:0000369!1.92e-07!4;UBERON:0002435!1.92e-07!4;UBERON:0000204!1.92e-07!4;UBERON:0010082!1.92e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.08e-79;8!UBERON:0003135;1.15e-57;11!UBERON:0000991;1.13e-30;21!UBERON:0003101;2.54e-29;22!UBERON:0000079;2.54e-29;22!UBERON:0002323;3.51e-12;45!UBERON:0003133;6.98e-10;44!UBERON:0002553;4.48e-08;52!UBERON:0004458;8.61e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.08e-79,8;UBERON:0003135,1.15e-57,11;UBERON:0000991,1.13e-30,21;UBERON:0009196,1.13e-30,21;UBERON:0009117,1.13e-30,21;UBERON:0005564,1.13e-30,21;UBERON:0004176,2.54e-29,22;UBERON:0003101,2.54e-29,22;UBERON:0000079,2.54e-29,22;UBERON:0002323,1.89e-14,46;UBERON:0003133,7.05e-14,48;UBERON:0004458,1.31e-13,49;UBERON:0003886,2.04e-12,54;UBERON:0005156,2.01e-11,59;UBERON:0000990,2.01e-11,59;UBERON:0002553,4.53e-11,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81091192588106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,2.13773924212448,0,4.26202816797038,12.655042602446,21.9730586728066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ADAD2 | |||
}} |
Revision as of 12:31, 20 January 2014
Short description: | p2@ADAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAD2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 13bp_to_ENST00000268624_5end |
EntrezGene: | ADAD2 |
HGNC: | 30714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.02e-23 | 7 |
germ cell | 2.02e-23 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 7.08e-79 | 8 |
male reproductive organ | 1.15e-57 | 11 |
gonad | 1.13e-30 | 21 |
indifferent external genitalia | 1.13e-30 | 21 |
indifferent gonad | 1.13e-30 | 21 |
gonad primordium | 1.13e-30 | 21 |
external genitalia | 2.54e-29 | 22 |
male organism | 2.54e-29 | 22 |
male reproductive system | 2.54e-29 | 22 |
body cavity | 1.89e-14 | 46 |
reproductive organ | 7.05e-14 | 48 |
body cavity or lining | 1.31e-13 | 49 |
body cavity precursor | 2.04e-12 | 54 |
reproductive structure | 2.01e-11 | 59 |
reproductive system | 2.01e-11 | 59 |
anatomical cavity | 4.53e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.51e-08 | 22 |
germ cell cancer | 3.51e-08 | 22 |