FFCP PHASE1:Hg19::chr17:30850461..30850471,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr17:30850461..30850471,- | |||
|id=chr17:30850461..30850471,- | |||
|ontology_enrichment_celltype=CL:0000945!2.44e-28!24;CL:0000826!2.44e-28!24;CL:0000838!2.05e-24!52;CL:0000542!6.99e-24!53;CL:0000051!6.99e-24!53;CL:0000148!4.11e-19!10;CL:0000541!4.11e-19!10;CL:0000147!1.81e-13!14;CL:0000893!2.09e-11!2;CL:0002489!2.09e-11!2;CL:0000809!2.09e-11!2;CL:0000808!2.09e-11!2;CL:0000894!2.09e-11!2;CL:0000806!2.09e-11!2;CL:0000807!2.09e-11!2;CL:0000805!2.09e-11!2;CL:0002425!2.09e-11!2;CL:0000710!3.16e-09!20;CL:0000236!4.24e-09!14;CL:0002087!1.80e-08!119;CL:0002567!3.18e-08!3;CL:0002031!5.46e-08!124;CL:0002566!8.34e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.06e-71;10!CL:0000147;5.76e-51;14!CL:0000710;9.76e-36;20!CL:0002567;1.82e-27;3!CL:0000075;1.66e-26;27!CL:0002566;2.08e-21;1!CL:0002127;6.31e-21;1!CL:0000911;6.31e-21;1!CL:0000814;6.31e-21;1!CL:0002077;9.55e-20;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.40e-71,10;CL:0000541,2.40e-71,10;CL:0000147,4.85e-51,14;CL:0000710,8.65e-36,20;CL:0002567,1.39e-27,3;CL:0000075,1.52e-26,27;CL:0002566,2.30e-21,1;CL:0002077,4.28e-21,34;CL:0002127,7.72e-21,1;CL:0000914,7.72e-21,1;CL:0000911,7.72e-21,1;CL:0000814,7.72e-21,1;CL:0002042,7.72e-21,1;CL:0002039,7.72e-21,1;CL:0002040,7.72e-21,1;CL:0002041,7.72e-21,1;CL:0000333,1.10e-16,41;CL:0000133,9.51e-12,59;CL:0000893,4.09e-11,2;CL:0002489,4.09e-11,2;CL:0000809,4.09e-11,2;CL:0000808,4.09e-11,2;CL:0000894,4.09e-11,2;CL:0000806,4.09e-11,2;CL:0000807,4.09e-11,2;CL:0000805,4.09e-11,2;CL:0002425,4.09e-11,2;CL:0000221,1.15e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002425;3.70e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.04e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;6.31e-21;1!DOID:74;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.16e-21,1;DOID:74,3.35e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.33e-18!7;UBERON:0002106!2.34e-15!3;UBERON:0004854!2.34e-15!3;UBERON:0009034!2.34e-15!3;UBERON:0002095!2.34e-15!3;UBERON:0004782!2.34e-15!3;UBERON:0003281!2.34e-15!3;UBERON:0009664!2.34e-15!3;UBERON:0002296!2.34e-15!3;UBERON:0005602!2.34e-15!3;UBERON:0001179!2.34e-15!3;UBERON:0006293!2.34e-15!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.53e-12,7;UBERON:0005057,3.53e-12,7;UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.410502947249729,0.393553906568396,0,0,0,0,0,0,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20682733195786,1.90994212779139,9.37739577680376,0,2.67351481028641,4.50514586765876,5.43070221998099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45710687191585,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77813997338147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50374268767766,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336760265072938,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr17:30850461..30850471,- | |||
}} |
Revision as of 14:39, 20 January 2014
Short description: | p@chr17:30850461..30850471, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:30850461..30850471, - |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.40e-71 | 10 |
melanoblast | 2.40e-71 | 10 |
pigment cell | 4.85e-51 | 14 |
neurecto-epithelial cell | 8.65e-36 | 20 |
light melanocyte | 1.39e-27 | 3 |
columnar/cuboidal epithelial cell | 1.52e-26 | 27 |
dark melanocyte | 2.30e-21 | 1 |
ecto-epithelial cell | 4.28e-21 | 34 |
innate effector T cell | 7.72e-21 | 1 |
immature NK T cell | 7.72e-21 | 1 |
effector T cell | 7.72e-21 | 1 |
mature NK T cell | 7.72e-21 | 1 |
immature NK T cell stage IV | 7.72e-21 | 1 |
immature NK T cell stage I | 7.72e-21 | 1 |
immature NK T cell stage II | 7.72e-21 | 1 |
immature NK T cell stage III | 7.72e-21 | 1 |
migratory neural crest cell | 1.10e-16 | 41 |
neurectodermal cell | 9.51e-12 | 59 |
thymocyte | 4.09e-11 | 2 |
double negative thymocyte | 4.09e-11 | 2 |
double-positive, alpha-beta thymocyte | 4.09e-11 | 2 |
DN4 thymocyte | 4.09e-11 | 2 |
DN1 thymic pro-T cell | 4.09e-11 | 2 |
DN2 thymocyte | 4.09e-11 | 2 |
DN3 thymocyte | 4.09e-11 | 2 |
immature single positive thymocyte | 4.09e-11 | 2 |
early T lineage precursor | 4.09e-11 | 2 |
ectodermal cell | 1.15e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.53e-12 | 7 |
immune organ | 3.53e-12 | 7 |
spleen | 7.26e-08 | 3 |
gastrointestinal system mesentery | 7.26e-08 | 3 |
stomach region | 7.26e-08 | 3 |
mesentery | 7.26e-08 | 3 |
gastrointestinal system serosa | 7.26e-08 | 3 |
mesentery of stomach | 7.26e-08 | 3 |
gut mesentery | 7.26e-08 | 3 |
dorsal mesentery | 7.26e-08 | 3 |
dorsal mesogastrium | 7.26e-08 | 3 |
peritoneal cavity | 7.26e-08 | 3 |
spleen primordium | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.16e-21 | 1 |
hematopoietic system disease | 3.35e-11 | 2 |