FFCP PHASE1:Hg19::chr17:38574169..38574180,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7153 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11989 | |||
|TSSclassifier=strong | |||
|UniProt=C9J5P2 | |||
|association_with_transcript=0bp_to_ENST00000357601,uc002huq.2_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_TOP2A_5end | |||
|id=chr17:38574169..38574180,- | |||
|ontology_enrichment_celltype=CL:0000066!1.64e-11!254;CL:0000548!2.26e-08!679;CL:0000004!2.26e-08!679;CL:0000255!2.26e-08!679;CL:0000012!3.78e-08!682;CL:0002319!8.60e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.48e-10,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.02e-61!235;DOID:14566!3.17e-60!239;DOID:0050686!9.42e-32!137;DOID:0050687!2.37e-30!143;DOID:305!6.60e-24!106;DOID:2531!5.84e-23!51;DOID:0060083!5.84e-23!51;DOID:1240!2.58e-18!39;DOID:8692!1.12e-13!31;DOID:7!2.82e-07!39;DOID:0060058!9.30e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.45e-16;39!DOID:2531;1.87e-15;51!DOID:0060083;1.87e-15;51!DOID:8692;1.80e-14;31!DOID:0050686;4.49e-08;137!DOID:0050687;5.33e-08;143!DOID:305;8.88e-08;106!DOID:162;1.80e-07;235!DOID:0060058;2.52e-07;10!DOID:14566;2.67e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.44e-62,235;DOID:14566,3.33e-61,239;DOID:0050686,2.12e-31,137;DOID:0050687,3.67e-30,143;DOID:2531,3.50e-25,51;DOID:0060083,3.50e-25,51;DOID:305,1.90e-24,106;DOID:1240,4.74e-20,39;DOID:8692,6.23e-15,31;DOID:0060058,2.67e-07,10;DOID:7,7.06e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0,2.40285509343189,0.527533956456907,0.247532705920093,0,0.672325146451775,0,0,0,0.984968464614303,0.612002073732759,0.626909442956176,8.01460763966959,12.7293215317782,8.913527411231,19.4090050599796,17.8158279106382,19.5989845471061,0,0,0.154816123316076,2.75826367343678,0.30120591877825,0.369754010166788,15.7258417178012,11.800046296456,4.69760702935756,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0,0,0,0.382273228125229,0,0,6.32121803460185,0.393419540227666,0.393010762749165,0.822405995998037,1.00311897234407,0.32592226663359,0,0,5.12488101671798,0,0,1.08321545506006,4.35510487067296,3.51160238411671,9.37296056240954,4.97430032014527,9.27369874352168,0,0,0,9.17805675850286,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0,0,1.34140171940727,1.91793842765295,7.59022220007589,0,0.869079113764942,2.3858578411533,0.973269740605272,7.84638982461763,3.99112915432615,2.81071314218003,1.44076983047484,1.45718115317017,2.22470665670658,0,0,0,0.238490624305342,1.14398982156026,0.371457501329565,3.57772333260069,0.860234595106124,1.04142150482278,1.69592382577203,1.67799774483962,3.57653454522088,2.29894463190492,1.29208379584664,0.71153252537342,0.33472061276467,1.20848795132744,1.52054421143703,0.24406205754817,0.735326160691737,0,7.76907636071494,7.85852804191594,6.64407734851601,0,2.84779697870439,1.28241220751285,0,0,0.872188104285069,0.496971951695318,2.78587125662075,0.264818361626438,5.16305917347865,3.90135220418193,1.12135520028461,1.06748995729705,0.24666754841716,3.11211035399766,1.34710672069688,2.12500474047496,0.302714855289863,0.576175924479999,1.87457145467037,0.624320153660641,1.1409436430889,1.34503812496621,5.63685593490071,5.34180716414834,6.60118791500568,1.83738754129404,4.79053837515895,0.929932030581889,0,0.247266929278557,0,0.718618141816238,10.6051751791062,9.75924455001321,4.98715407871529,1.75591048352335,2.14541457059314,1.65261864797256,4.76415169272088,6.99619579186562,0.640672166455702,1.69545520927649,6.60200411385685,2.16410311400722,1.03056216018252,0,18.2278438820568,2.82567314967476,4.79624171063818,0.644349290496095,0.484938170456436,4.26011511019937,3.72782763442269,2.88253006927829,0.773043412653187,1.90922284413584,2.00763216772303,8.90408054746046,11.2650303073262,8.01738205799677,9.95146128147556,9.58819233327388,5.10968302706162,0,0.643240938192885,0,0,0,5.08719240171329,5.90046415273356,4.82022059766964,5.18381671842252,6.75426276686459,6.40630671599961,6.0674088672074,5.49420102350969,5.38646019724947,0,0,0,1.47008711385542,0,0,0,11.0365774853663,6.51838724278502,2.23038153388083,0.768251997860379,0,5.42856451022807,4.35165692245089,0.325808305310325,0,2.88662684050547,2.43453850447661,0.939269553886573,0.721832238805369,0.925971025153221,0.951270761172991,2.37061319387782,1.71697232418975,0.984868024349589,0.468008530278475,4.31030370637312,0,0.16798212819886,0.850650583454319,7.34379886163356,7.55648240136301,4.21720947081732,7.8826118063351,3.52193736052904,0.414656231081544,0.144119953416961,0,5.65131259200304,0.763976851116555,0,3.4214489204541,2.26220483947312,3.00343057843917,0.285826432630578,1.45770409648969,0.43596006883328,9.0939474417978,0,0,2.535908257668,0,1.04007436911366,1.54324424557285,0,1.0656887160644,1.85871391755592,0,4.11620168390384,6.18898750158097,0.710783897485092,1.58390374586686,0,0,0.699810938274399,0,0.502257091432126,0,0.239624855491583,0,5.70547620162874,2.46128221334885,2.26023954805422,3.22309733831812,15.0194092951327,0,0.215627574859517,0.256686072559497,6.09827098133912,7.8083912314573,0,2.01019518401218,3.82763250991898,0,0,0,0.24538298343828,0,0.271265023699736,0.623912584592421,1.96271887676878,1.10391690523754,2.10854546986884,0,0,0,3.98535359121262,1.65932251687533,4.17041349446798,0.195801157462741,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0.604780586659361,0,1.07423381301644,0.280660094433074,0,1.02341449813341,0,0,6.32259744590888,1.24293207719189,6.07740954502188,3.63478100428535,2.44041794765914,5.19695633243976,0.200506470303285,0.0920809889358963,5.1666501674073,5.28064387219479,0.393373244878272,1.35359883872224,3.38867483259425,0,0,3.69430701125065,1.13733384070897,0.510281115829547,3.67057057373637,0,0.541892875087706,0,2.29388645740534,0,1.34324852833307,34.2045407567658,23.0063196901912,4.61610225209501,0.984043937099117,0.325378394664303,0.309123034943167,10.8051968485645,11.7163489887235,1.14853107599234,1.30012049207304,3.21367859688319,0.580024309752732,3.38906957652218,3.07007349452259,4.82428003695857,5.15617175367713,1.45016693914229,5.53973078204656,1.60257664164127,0.165284915360978,0.960950336825531,3.82838137483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| |||
|short_description=p2@TOP2A | |||
}} |
Revision as of 15:09, 20 January 2014
Short description: | p2@TOP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TOP2A_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000357601, uc002huq.2_5end |
EntrezGene: | TOP2A |
HGNC: | 11989 |
UniProt: | C9J5P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.48e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.44e-62 | 235 |
disease of cellular proliferation | 3.33e-61 | 239 |
organ system cancer | 2.12e-31 | 137 |
cell type cancer | 3.67e-30 | 143 |
hematologic cancer | 3.50e-25 | 51 |
immune system cancer | 3.50e-25 | 51 |
carcinoma | 1.90e-24 | 106 |
leukemia | 4.74e-20 | 39 |
myeloid leukemia | 6.23e-15 | 31 |
lymphoma | 2.67e-07 | 10 |
disease of anatomical entity | 7.06e-07 | 39 |