FFCP PHASE1:Hg19::chr17:42607348..42607359,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_at_chr17:42607348..42607359,+ | |||
|id=chr17:42607348..42607359,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.63e-20!254;CL:0002076!3.06e-11!43;CL:0000223!8.19e-10!59;CL:0000082!3.91e-08!19;CL:0002202!3.99e-08!9;CL:0002632!3.99e-08!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.57e-10,253;CL:0002076,1.46e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.51e-07;3!UBERON:0003353;2.51e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!1.72e-48!239;DOID:162!1.85e-48!235;DOID:0050687!1.23e-35!143;DOID:305!1.07e-31!106;DOID:0050686!1.85e-21!137;DOID:299!1.32e-13!25;DOID:1749!2.12e-12!14;DOID:2531!1.15e-09!51;DOID:0060083!1.15e-09!51;DOID:1036!2.53e-08!8;DOID:7!5.87e-07!39;DOID:1240!9.65e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.80e-20;8!DOID:1749;3.86e-15;14!DOID:299;7.47e-14;25!DOID:4468;1.03e-10;2!DOID:7;1.25e-07;39!DOID:305;4.94e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.03e-20,8;DOID:305,1.48e-19,106;DOID:162,1.58e-16,235;DOID:14566,4.99e-16,239;DOID:1749,7.25e-15,14;DOID:0050687,2.05e-14,143;DOID:299,5.25e-14,25;DOID:4468,8.15e-11,2;DOID:0050686,5.86e-10,137;DOID:7,4.62e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004802!3.91e-08!19;UBERON:0000115!3.91e-08!19;UBERON:0000344!2.78e-07!12;UBERON:0004119!3.05e-07!169;UBERON:0000925!3.05e-07!169;UBERON:0006595!3.05e-07!169;UBERON:0001007!4.24e-07!155;UBERON:0001555!4.24e-07!155;UBERON:0007026!4.24e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0.0774672005803016,0.853015394924529,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.351339142772504,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0.283550194484773,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.40101294060657,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,2.55225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.384888450902048,0.670302275535787,3.26672954583968,0,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,4.16613877397145,0,1.47024129588619,0,0.721346064882224,0.142283686696828,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0,0,0.677167111206413,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0.66614393599564,0,0.18714054040822,0,0.485442086998054,0.111443384277478,0.568272293612826,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,0.492339221844278,0,2.15684042753584,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0.508507300585533,0.945550727071745,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0.628303510868405,0.54323685961004,0,0,0,2.04386596391473,0,0.166211681900156,0.902382642468723,1.56850027454192,2.3495022176618,11.1954702307269,1.11255605286265,3.37596903244843,2.93819054686466,4.38194521445217,0.216388639742091,0,0,0,0.296521128680622,0,0,0,0,0,0,0.391329237864179,1.69946265673865,0,0,0,0,0.901940516486955,0,0.664653872707185,0.330991955875499,0,0,4.83836228250648,0.138674673013139,1.73559738335131,0.293977192243133,1.21882889212564,0,0.343972064943233,0,0.219267951258557,0.164230914106418,0,0,0,1.50746117111426,0.596143835108969,0,0,0.64127056201227,0.213452994739353,0.39961921916426,5.04316460039371,0.572682980829578,0.171594997861965,0.432164393964449,0.372757606696298,0,2.17446729717782,1.569042694685,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,1.77813997338147,0,0,0.321506296930038,0.137539436597234,0,1.349843349309,0,0,0.670869375198532,0,0,1.05600336519407,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,1.23138781124008,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0.121792598380896,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,1.37478448758317,0,0,0.470531639396343,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,1.3503982678964,0.506827321959218,0.256241518587947,0,0,0,0,0.132864840313363,0.327130788511688,0.655219697692825,0.245772908753719,1.69049698686902,0.19998739585493,0.106691729694141,0,0.567515953566836,0.184105950251841,0,0,0,0.323474434190045,0.314531883711793,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.235939446695481,1.10057159113007,2.4260389891571,0,0,0,0,0.60511520611056,0,0,1.31017534008077,4.5835386727284,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,0,1.15233987555779,0,0,0,2.48207065856333,2.8920164491938,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0,0,0.335566295393377,0.098150233615243,0.853425474875886,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0.109940516745429,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.299823467774787,1.07132363163395,7.76368717774522,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0,0,0.756998549010474,0.98339014767326,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,2.52350132694021,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr17:42607348..42607359,+ | |||
}} |
Revision as of 15:41, 20 January 2014
Short description: | p@chr17:42607348..42607359, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:42607348..42607359, + |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.57e-10 | 253 |
endo-epithelial cell | 1.46e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.03e-20 | 8 |
carcinoma | 1.48e-19 | 106 |
cancer | 1.58e-16 | 235 |
disease of cellular proliferation | 4.99e-16 | 239 |
squamous cell carcinoma | 7.25e-15 | 14 |
cell type cancer | 2.05e-14 | 143 |
adenocarcinoma | 5.25e-14 | 25 |
clear cell adenocarcinoma | 8.15e-11 | 2 |
organ system cancer | 5.86e-10 | 137 |
disease of anatomical entity | 4.62e-08 | 39 |