FFCP PHASE1:Hg19::chr17:56474397..56474406,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:56474397..56474406,- | |||
|id=chr17:56474397..56474406,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.05e-29;1!UBERON:0007297;1.91e-15;2 | |||
|ontology_enrichment_disease=DOID:305!7.10e-12!106;DOID:3119!2.91e-08!14;DOID:0050687!8.86e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.05e-29;1!DOID:1357;2.05e-29;1!DOID:3493;1.91e-15;2!DOID:5409;1.70e-08;4!DOID:0050615;4.19e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.20e-29,1;DOID:1357,4.20e-29,1;DOID:3493,1.78e-15,2;DOID:5409,1.70e-08,4;DOID:0050615,4.58e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.73e-12!35;UBERON:0000160!1.21e-09!27;UBERON:0004119!1.97e-09!169;UBERON:0000925!1.97e-09!169;UBERON:0006595!1.97e-09!169;UBERON:0001007!3.87e-09!155;UBERON:0001555!3.87e-09!155;UBERON:0007026!3.87e-09!155;UBERON:0000059!1.51e-08!11;UBERON:0003929!3.04e-08!54;UBERON:0001155!4.63e-08!9;UBERON:0004921!1.30e-07!129;UBERON:0004185!1.30e-07!129;UBERON:0006947!1.58e-07!3;UBERON:0004054!1.58e-07!3;UBERON:0005911!2.31e-07!82;UBERON:0003101!6.31e-07!22;UBERON:0000079!6.31e-07!22;UBERON:0004907!7.78e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.05e-29;1!UBERON:0001764;2.05e-29;1!UBERON:0006868;2.05e-29;1!UBERON:0001825;2.05e-29;1!UBERON:0006947;9.43e-11;3!UBERON:0004054;9.43e-11;3!UBERON:0005904;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.33e-29,1;UBERON:0006868,1.33e-29,1;UBERON:0001764,4.20e-29,1;UBERON:0001825,4.20e-29,1;UBERON:0006947,8.17e-11,3;UBERON:0004054,8.17e-11,3;UBERON:0005904,1.96e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0.503865495708552,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0.0874599999961957,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0,0,0.442317039724898,0.591095237907095,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.565412285735763,0.432777279484182,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0.189932387867636,0.391102765469606,0.0801588202515337,0.640358984218058,0,0.288180834308212,0.229073192331831,0,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,1.18174773460835,0.576911008668165,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,1.09937867375164,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0.523813388962845,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0.236387681767936,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0.392600934460972,1.34109717480496,0,0,0,0,0,1.98950775161368,0,2.14597555874024,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0.218531143927391,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr17:56474397..56474406,- | |||
}} |
Revision as of 16:31, 20 January 2014
Short description: | p@chr17:56474397..56474406, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr17:56474397..56474406, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 1.33e-29 | 1 |
seminal fluid secreting gland | 1.33e-29 | 1 |
maxillary sinus | 4.20e-29 | 1 |
paranasal sinus | 4.20e-29 | 1 |
male genital duct | 8.17e-11 | 3 |
internal male genitalia | 8.17e-11 | 3 |
duct of male reproductive system | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.20e-29 | 1 |
maxillary sinus cancer | 4.20e-29 | 1 |
signet ring cell adenocarcinoma | 1.78e-15 | 2 |
lung small cell carcinoma | 1.70e-08 | 4 |
respiratory system cancer | 4.58e-08 | 16 |