FFCP PHASE1:Hg19::chr18:46147872..46147919,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23925 | |||
|TSSclassifier=not | |||
|UniProt=O43310 | |||
|association_with_transcript=-57bp_to_ENST00000420275_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_4_at_CTIF_5end | |||
|id=chr18:46147872..46147919,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.05e-26!180;CL:0000057!1.43e-21!75;CL:0000144!2.95e-16!625;CL:0000548!4.75e-14!679;CL:0000004!4.75e-14!679;CL:0000255!4.75e-14!679;CL:0000012!1.28e-13!682;CL:0000077!4.25e-12!19;CL:0000222!5.35e-12!119;CL:0000183!1.63e-11!59;CL:0002371!3.63e-11!591;CL:0000680!2.42e-10!57;CL:0000056!2.42e-10!57;CL:0000355!2.42e-10!57;CL:0000187!1.92e-09!54;CL:0000003!4.66e-09!722;CL:0002620!1.41e-08!23;CL:0000192!1.44e-08!42;CL:0000514!1.44e-08!42;CL:0000393!8.29e-08!60;CL:0000211!8.29e-08!60;CL:0000220!1.59e-07!246;CL:1000507!1.78e-07!12;CL:1000494!1.78e-07!12;CL:0002321!2.95e-07!248;CL:0002334!7.89e-07!12;CL:1000449!8.64e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.96e-20;19!CL:0000077;2.29e-13;19!CL:1000507;3.06e-13;10!CL:1000494;3.06e-13;10!CL:1000449;2.96e-11;15!CL:0002620;1.24e-10;23!CL:1000497;1.46e-09;17!CL:0002518;1.46e-09;17!CL:0002681;2.30e-08;12!CL:0002584;2.30e-08;12!CL:0002537;3.41e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.85e-20,19;CL:0000077,2.31e-13,19;CL:1000507,2.49e-13,10;CL:1000494,2.49e-13,10;CL:0000057,1.30e-12,76;CL:1000449,3.19e-11,15;CL:0002620,1.38e-10,23;CL:1000497,1.56e-09,17;CL:0002518,1.56e-09,17;CL:0002681,2.64e-08,12;CL:0002584,2.64e-08,12;CL:0002537,4.68e-08,5;CL:0000222,5.97e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.22e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;9.44e-08;5!DOID:450;9.44e-08;5!DOID:66;9.44e-08;5!DOID:423;9.44e-08;5!DOID:0080000;9.44e-08;5!DOID:11722;9.44e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.02e-08,5;DOID:450,9.02e-08,5;DOID:66,9.02e-08,5;DOID:423,9.02e-08,5;DOID:0080000,9.02e-08,5;DOID:11722,9.02e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005256!2.07e-14!143;UBERON:0005631!2.18e-12!14;UBERON:0000158!2.18e-12!14;UBERON:0000478!2.29e-11!24;UBERON:0000914!3.13e-11!83;UBERON:0002329!3.13e-11!83;UBERON:0003077!3.13e-11!83;UBERON:0003059!3.13e-11!83;UBERON:0007282!3.13e-11!83;UBERON:0009618!3.13e-11!83;UBERON:0007285!3.13e-11!83;UBERON:0000475!1.75e-10!365;UBERON:0002100!1.91e-09!216;UBERON:0000486!6.77e-09!82;UBERON:0001134!7.81e-09!61;UBERON:0002036!7.81e-09!61;UBERON:0003082!7.81e-09!61;UBERON:0004290!1.13e-08!70;UBERON:0002385!3.62e-08!63;UBERON:0001015!3.62e-08!63;UBERON:0000383!3.62e-08!63;UBERON:0004871!5.71e-08!8;UBERON:0009773!1.78e-07!12;UBERON:0001231!1.78e-07!12;UBERON:0004810!1.78e-07!12;UBERON:0000305!4.32e-07!7;UBERON:0004923!5.43e-07!57;UBERON:0003124!6.71e-07!7;UBERON:0004211!8.64e-07!16;UBERON:0001285!8.64e-07!16;UBERON:0007684!8.64e-07!16;UBERON:0003220!8.64e-07!16;UBERON:0004208!8.64e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.02e-16;24!UBERON:0005631;1.02e-14;10!UBERON:0000158;1.02e-14;10!UBERON:0004211;3.06e-13;10!UBERON:0009773;3.06e-13;10!UBERON:0001231;3.06e-13;10!UBERON:0004810;3.06e-13;10!UBERON:0006555;2.96e-11;15!UBERON:0004819;2.96e-11;15!UBERON:0001285;2.96e-11;15!UBERON:0007684;2.96e-11;15!UBERON:0000305;5.71e-11;7!UBERON:0001851;9.50e-10;15!UBERON:0001225;2.30e-08;12!UBERON:0008987;2.30e-08;12!UBERON:0000353;1.20e-07;15!UBERON:0001987;9.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.07e-19,14;UBERON:0000158,1.07e-19,14;UBERON:0000478,2.07e-16,24;UBERON:0004810,2.49e-13,10;UBERON:0004871,2.67e-12,8;UBERON:0004211,3.19e-11,15;UBERON:0009773,3.19e-11,15;UBERON:0001231,3.19e-11,15;UBERON:0001285,3.19e-11,15;UBERON:0007684,3.19e-11,15;UBERON:0004208,3.19e-11,15;UBERON:0000305,7.82e-11,7;UBERON:0003124,1.63e-10,7;UBERON:0006555,2.53e-10,16;UBERON:0004819,2.53e-10,16;UBERON:0001851,1.16e-09,15;UBERON:0001225,2.64e-08,12;UBERON:0008987,2.64e-08,12;UBERON:0002417,8.89e-08,60;UBERON:0000916,8.89e-08,60;UBERON:0000353,1.36e-07,15;UBERON:0001987,9.82e-07,4;UBERON:0004340,9.82e-07,4 | |||
|phase1_expression=0.363356758541113,0.428201047781966,1.26858963686374,2.00146596706261,0,1.74467704820074,0,0,0,2.94880723801811,1.39560233594486,7.42700665242586,5.53910654279752,0.123766352960047,0.331397375727916,0.672325146451775,1.80808358407193,0,0.487932798790507,0.492484232307152,1.83600622119828,0,0.286235987131057,0,1.00434111675842,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,1.15877215168659,0,0,0.283604451492204,1.55210578223795,0.87834785693126,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.379891534993739,1.32409180813219,1.14734648299525,0.709336764396714,0.560677600142307,0,0.98667019366864,0.311211035399766,0,0.163461903113459,0.605429710579726,0,7.26396438684769,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0.140450806702248,0.408308342509787,0.737005903870608,0.309977343527296,0,0.247266929278557,0.910161361938026,5.03032699271367,0.168336113954066,1.25118519871964,1.6623846929051,1.75591048352335,2.14541457059314,0.300476117813194,0.680593098960126,3.40840307808838,3.20336083227851,2.54318281391474,4.50136644126603,3.50378599410692,4.3798891807757,2.79175284497385,1.35021065793013,1.07180705677318,1.7670364197088,2.02509777013059,0,3.19508633264953,2.21654616100809,3.73033303083073,1.15956511897978,0.545492241181669,0.573609190778008,0,0,0,0,0.252320850875628,0,0,0,2.76269842704961,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,4.115740113314,2.94017422771084,0,0,0,0,0.122988438543114,0.514703430895577,0.109750285408626,0,0.201057944823262,0.648119116109707,0.325808305310325,1.03993478527958,0,0,2.58299127318808,0,0,0,0,0,0,0,0,0,1.00789276919316,0.708875486211932,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,14.0163855431701,0.87192013766656,7.1871520104531,0.775630294546667,0,0,2.6593811658487,1.04007436911366,0.257207374262142,0,0,2.28764789853036,0.542621605391443,1.64648067356154,0,1.77695974371273,1.58390374586686,14.1676507218005,6.10073421020206,17.6952194392241,0,0,0,4.55287225434007,2.29723871668228,0,1.30303176000821,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0.415941723061614,1.78428988797162,1.57702415033935,0.702848489956279,0.902838299183157,0,0,1.32845119707087,0.921845842708516,0.347534457872331,0.979005787313703,1.02943027143257,0,0,0,10.6094650006191,14.9791895559447,4.5358543999452,0.992431231275107,3.37616341233737,0.841980283299221,2.30650468660262,2.04682899626681,1.76939313257968,2.96836132889982,0.925258162815933,0.355123450626254,0.246381468041427,2.59627214591811,0.116210378459959,0,0.40101294060657,0,0.229628896329213,0.546273504020151,0.262248829918848,9.02399225814824,1.77135275340154,6.27479815341484,1.46139224653261,1.47772280450026,0,0.170093705276516,1.0795795805107,0,6.50271450105247,7.5253466078228,2.03901018436031,2.49322802678617,5.1491193586101,0,0,0,1.31205858279882,0.325378394664303,0.206082023295445,0.183138929636687,0.165018999841176,0,0.650060246036521,9.64103579064957,0,0.462145851343933,0.460511024178389,0.689182862422653,0.537101224341368,0.145016693914229,0.596586391912706,0.0890320356467374,0.165284915360978,0.384380134730212,1.65896526242959,0,2.78907329578371,3.46293581513704,0.6970372701606,0.308033580176089,1.06461206063404,1.73986598415015,0.9266210955196,0.286249773483982,3.34942532423701,0.949138274156178,4.38449446024797,1.27948895655667,0,0,0,2.33834194858309,1.92175920815238,1.64937363283961,1.41527737101321,0,0.842516912477962,17.5548146072253,0,2.11300293513511,1.22849920267187,0.424216295861138,0,0.551365343546124,0,0,1.73632660280006,0,0.202910376962704,0.6196469961995,0.563391205064483,0.573645408816206,1.08073945114433,0,0,0,0.329294892959902,0.75894634753143,3.14941248220485,0.192444225451024,0,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.6766065275058,31.7752208490923,82.011907460495,0,0,6.78983100639726,0,0,0,0,0,0.715880777515084,0,0,1.07842021376792,0,0,0,0,32.2297271419447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0.217294743844016,12.1220440698129,1.4655614944298,9.59462596833542,0,0,0,0,0,0,0,0,1.47698645169619,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.51595809741485,0,0,0,0.193978032976839,0,0,7.5373058555713,0.19871461170299,0,0,0.64127056201227,0.640358984218058,0,0,0,0,0,0,0,3.80531777006119,3.03348254305766,0,0,0,0,0,5.15718529703949,0,0,0,0,0,0,0,0,9.00749708856009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0.739202355635845,0,0.767660789277781,0,0,0.25426853765475,0,3.45688596480507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| |||
|short_description=p4@CTIF | |||
}} |
Revision as of 19:17, 20 January 2014
Short description: | p4@CTIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CTIF_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -57bp_to_ENST00000420275_5end |
EntrezGene: | CTIF |
HGNC: | 23925 |
UniProt: | O43310 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.85e-20 | 19 |
mesothelial cell | 2.31e-13 | 19 |
kidney tubule cell | 2.49e-13 | 10 |
nephron tubule epithelial cell | 2.49e-13 | 10 |
fibroblast | 1.30e-12 | 76 |
epithelial cell of nephron | 3.19e-11 | 15 |
skin fibroblast | 1.38e-10 | 23 |
kidney cell | 1.56e-09 | 17 |
kidney epithelial cell | 1.56e-09 | 17 |
kidney cortical cell | 2.64e-08 | 12 |
renal cortical epithelial cell | 2.64e-08 | 12 |
amnion mesenchymal stem cell | 4.68e-08 | 5 |
mesodermal cell | 5.97e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.07e-19 | 14 |
membranous layer | 1.07e-19 | 14 |
extraembryonic structure | 2.07e-16 | 24 |
nephron tubule epithelium | 2.49e-13 | 10 |
somatic layer of lateral plate mesoderm | 2.67e-12 | 8 |
nephron epithelium | 3.19e-11 | 15 |
renal tubule | 3.19e-11 | 15 |
nephron tubule | 3.19e-11 | 15 |
nephron | 3.19e-11 | 15 |
uriniferous tubule | 3.19e-11 | 15 |
nephrogenic mesenchyme | 3.19e-11 | 15 |
amnion | 7.82e-11 | 7 |
chorion | 1.63e-10 | 7 |
excretory tube | 2.53e-10 | 16 |
kidney epithelium | 2.53e-10 | 16 |
cortex | 1.16e-09 | 15 |
cortex of kidney | 2.64e-08 | 12 |
renal parenchyma | 2.64e-08 | 12 |
abdominal segment of trunk | 8.89e-08 | 60 |
abdomen | 8.89e-08 | 60 |
parenchyma | 1.36e-07 | 15 |
placenta | 9.82e-07 | 4 |
allantois | 9.82e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.02e-08 | 5 |
myotonic disease | 9.02e-08 | 5 |
muscle tissue disease | 9.02e-08 | 5 |
myopathy | 9.02e-08 | 5 |
muscular disease | 9.02e-08 | 5 |
myotonic dystrophy | 9.02e-08 | 5 |