FFCP PHASE1:Hg19::chr18:52259406..52259421,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr18:52259406..52259421,+ | |||
|id=chr18:52259406..52259421,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.62e-41;1!UBERON:0008814;3.81e-21;2!UBERON:0010056;3.81e-21;2 | |||
|ontology_enrichment_disease=DOID:178!6.31e-21!1;DOID:326!6.31e-21!1;DOID:3978!6.31e-21!1;DOID:3394!6.31e-21!1;DOID:5844!6.31e-21!1;DOID:114!3.70e-11!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!1.82e-27!3;UBERON:0001033!1.82e-27!3;UBERON:0010056!1.82e-27!3;UBERON:0002372!2.30e-21!1;UBERON:0001961!2.30e-21!1;UBERON:0001744!2.30e-21!1;UBERON:0001735!2.30e-21!1;UBERON:0001042!1.28e-18!10;UBERON:0009145!1.28e-18!10;UBERON:0000078!5.08e-18!18;UBERON:0006562!5.40e-17!11;UBERON:0000165!9.86e-12!28;UBERON:0000930!9.86e-12!28;UBERON:0000341!2.47e-11!2;UBERON:0003127!2.73e-11!2;UBERON:0001557!4.04e-10!19;UBERON:0000166!3.26e-09!21;UBERON:0007023!2.92e-08!115;UBERON:0000072!2.70e-07!46;UBERON:0001444!5.65e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.81e-40;1!UBERON:0001961;1.81e-40;1!UBERON:0001744;1.81e-40;1!UBERON:0001042;1.81e-40;1!UBERON:0001735;1.81e-40;1!UBERON:0000341;5.15e-21;2!UBERON:0006562;5.15e-21;2!UBERON:0003127;6.96e-21;2!UBERON:0001043;1.22e-14;3!UBERON:0001723;1.40e-14;3!UBERON:0001033;1.40e-14;3!UBERON:0000974;6.55e-08;6!UBERON:0003126;6.39e-07;7!UBERON:0001005;6.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.48e-40,1;UBERON:0001961,1.48e-40,1;UBERON:0001744,1.48e-40,1;UBERON:0001735,1.48e-40,1;UBERON:0000341,5.70e-21,2;UBERON:0003127,6.96e-21,2;UBERON:0001042,6.93e-17,10;UBERON:0009145,6.93e-17,10;UBERON:0006562,1.88e-15,11;UBERON:0001043,1.22e-14,3;UBERON:0009143,1.22e-14,3;UBERON:0001723,1.40e-14,3;UBERON:0001033,1.40e-14,3;UBERON:0010056,1.40e-14,3;UBERON:0001557,2.17e-09,19;UBERON:0007023,2.58e-09,114;UBERON:0000072,2.21e-08,47;UBERON:0000166,3.04e-08,22;UBERON:0001041,5.87e-08,87;UBERON:0000065,2.17e-07,54;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.24406640151565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34557380091079,0,0,0,0,0,0,3.48346796635138,0.342233301085281,2.96349033264185,1.57788851863888,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:52259406..52259421,+ | |||
}} |
Revision as of 19:24, 20 January 2014
Short description: | p@chr18:52259406..52259421, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:52259406..52259421, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 1.48e-40 | 1 |
mucosa-associated lymphoid tissue | 1.48e-40 | 1 |
lymphoid tissue | 1.48e-40 | 1 |
tonsillar ring | 1.48e-40 | 1 |
throat | 5.70e-21 | 2 |
open tracheal system trachea | 6.96e-21 | 2 |
chordate pharynx | 6.93e-17 | 10 |
pharyngeal region of foregut | 6.93e-17 | 10 |
pharynx | 1.88e-15 | 11 |
esophagus | 1.22e-14 | 3 |
esophageal region | 1.22e-14 | 3 |
tongue | 1.40e-14 | 3 |
gustatory system | 1.40e-14 | 3 |
future tongue | 1.40e-14 | 3 |
upper respiratory tract | 2.17e-09 | 19 |
adult organism | 2.58e-09 | 114 |
segment of respiratory tract | 2.21e-08 | 47 |
oral opening | 3.04e-08 | 22 |
foregut | 5.87e-08 | 87 |
respiratory tract | 2.17e-07 | 54 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |