FFCP PHASE1:Hg19::chr19:1495523..1495538,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1239 | |||
|description=CAGE_peak_at_chr19:1495523..1495538,+ | |||
|id=chr19:1495523..1495538,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.88e-14;12!CL:0002521;3.03e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.31e-14,12;CL:0002521,2.60e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.41e-10;11!UBERON:0009497;6.66e-09;13!UBERON:0003056;6.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!8.89e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.73e-15;19!UBERON:0006925;4.73e-15;19!UBERON:0002423;4.04e-11;25!UBERON:0002365;1.09e-10;31!UBERON:0002330;1.09e-10;31!UBERON:0000473;5.18e-10;8!UBERON:0002108;1.93e-09;4!UBERON:0002368;1.91e-07;33!UBERON:0003135;2.77e-07;11!UBERON:0002190;3.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.65e-15,19;UBERON:0006925,4.65e-15,19;UBERON:0008836,4.65e-15,19;UBERON:0008835,7.99e-13,22;UBERON:0003894,7.99e-13,22;UBERON:0009854,3.30e-12,23;UBERON:0007499,3.99e-11,25;UBERON:0009497,3.99e-11,25;UBERON:0000015,3.99e-11,25;UBERON:0002423,3.99e-11,25;UBERON:0006235,3.99e-11,25;UBERON:0004161,3.99e-11,25;UBERON:0002365,5.75e-11,31;UBERON:0002330,5.75e-11,31;UBERON:0009856,1.20e-10,26;UBERON:0000473,5.56e-10,8;UBERON:0002108,1.98e-09,4;UBERON:0002530,1.30e-07,59;UBERON:0002368,1.42e-07,35;UBERON:0004921,1.54e-07,118;UBERON:0002190,2.60e-07,3;UBERON:0003135,2.91e-07,11;UBERON:0003929,5.73e-07,54 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0.446961094427288,0,2.53299878168311,0,3.65659879479774,0,0,0.436882744260345,0.791300934685361,0,0,2.01697543935533,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0.665188192387692,0.175669571386252,3.53643503843824,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0.98667019366864,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.853815942907168,0.530119073285941,0.813357600086629,0.310983165046111,1.26160425437814,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.709840800239063,1.01150814046861,0.241011029883482,0.55146986366197,0.217879444092406,0.949082476444386,0.539325232640658,0.392442930250692,0,0,0,0,0,27.8861076608028,14.7424082501644,11.8157981336281,0,1.8448265781467,0,0.329250856225877,0,0,0.648119116109707,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0.514137463516618,0.901029173531752,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0.213455115606889,0.303127571446259,0,0.604780586659361,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,2.77976734060731,0.601519410909855,0,0.114814448164607,0,0,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0.325378394664303,1.23649213977267,0.0915694648183434,0,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0,0.330569830721956,0.192190067365106,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.491245205065606,0,0,0.211107635297664,0,0,0,0,0.670302275535787,2.17781969722645,1.7887322147588,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,0,0.156679895773023,0,0.338583555603207,0.481764225311099,0,1.27753871307098,0,0,0,0,0,1.39203086947621,0,0.540911356951966,0,0,0,0,0.606802608747567,0,0.568272293612826,0,0,0,0.994147647766298,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.371072392647405,0,0.520855522170466,2.0990399999087,0,0.341380344856499,0.508507300585533,0,0.344743373241465,0,0,0,0.120596438625408,1.52581736317083,0,0.295547618953547,0.219385397153973,0.21787692703798,0.278847488557207,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.325942115766024,0,0,0,0,0,0,2.25595660617181,1.76456280885966,1.51039428278258,0.948768663620925,0.476809736941136,0,0,0.282706142867882,0,0,1.06149077404007,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0.242780379534093,0.789168805698781,3.62972148145992,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0.19351266257817,0.438535902517113,0.328461828212837,0.0969890164884194,0.176512253383001,2.71176888936639,0.137041924646751,0,0,0.586654148204409,0.400794101257669,0.213452994739353,0.19980960958213,0.288180834308212,0.343609788497747,0,0,0.124252535565433,0.471388069233591,0,0.418411385249333,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.916641696046735,0,0.599037001496973,0.858452096273142,0,0.134366944973453,0,0,2.20592910460226,2.06039645952916,2.2243169471881,0,0,0.795229689809303,0.408610218334727,0.321506296930038,1.2378549293751,3.32352270423348,0,0,0.0607495566580247,0.335434687599266,0.394028536495991,0.262272940674991,0,0.179287339332845,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0.164185041498678,0.340776043570843,0.226624183040251,7.91382061861645,3.97520666736664,0.129282956361551,0.26446520348538,0,1.40963004463334,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.976210119215705,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0.303298235083296,0,0.4705316393963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| |||
|short_description=p@chr19:1495523..1495538,+ | |||
}} |
Revision as of 20:17, 20 January 2014
Short description: | p@chr19:1495523..1495538, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr19:1495523..1495538, + |
Coexpression cluster: | C1239_Hepatocyte_liver_small_testis_colon_breast_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.31e-14 | 12 |
subcutaneous fat cell | 2.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.65e-15 | 19 |
digestive gland | 4.65e-15 | 19 |
liver bud | 4.65e-15 | 19 |
hepatic diverticulum | 7.99e-13 | 22 |
liver primordium | 7.99e-13 | 22 |
digestive tract diverticulum | 3.30e-12 | 23 |
epithelial sac | 3.99e-11 | 25 |
epithelium of foregut-midgut junction | 3.99e-11 | 25 |
anatomical boundary | 3.99e-11 | 25 |
hepatobiliary system | 3.99e-11 | 25 |
foregut-midgut junction | 3.99e-11 | 25 |
septum transversum | 3.99e-11 | 25 |
exocrine gland | 5.75e-11 | 31 |
exocrine system | 5.75e-11 | 31 |
sac | 1.20e-10 | 26 |
testis | 5.56e-10 | 8 |
small intestine | 1.98e-09 | 4 |
gland | 1.30e-07 | 59 |
endocrine gland | 1.42e-07 | 35 |
subdivision of digestive tract | 1.54e-07 | 118 |
subcutaneous adipose tissue | 2.60e-07 | 3 |
male reproductive organ | 2.91e-07 | 11 |
gut epithelium | 5.73e-07 | 54 |