FFCP PHASE1:Hg19::chr19:15090472..15090482,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6511 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10944 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N753 | |||
|association_with_transcript=-3bp_to_ENST00000544886_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_6_at_SLC1A6_5end | |||
|id=chr19:15090472..15090482,- | |||
|ontology_enrichment_celltype=CL:0002537!1.06e-09!5;CL:0002541!6.75e-08!3;CL:0000349!7.97e-08!3;CL:0002577!7.97e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;4.09e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.09e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.24e-88;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.96e-34!57;UBERON:0005068!1.96e-34!57;UBERON:0006241!1.96e-34!57;UBERON:0007135!1.96e-34!57;UBERON:0002616!6.79e-30!59;UBERON:0000955!3.58e-27!69;UBERON:0006238!3.58e-27!69;UBERON:0002780!4.26e-25!41;UBERON:0001890!4.26e-25!41;UBERON:0006240!4.26e-25!41;UBERON:0001869!5.98e-25!32;UBERON:0001017!1.51e-24!82;UBERON:0003080!1.98e-24!42;UBERON:0002020!2.09e-23!34;UBERON:0003528!2.09e-23!34;UBERON:0001893!2.38e-23!34;UBERON:0005743!3.42e-23!86;UBERON:0005631!6.11e-22!14;UBERON:0000158!6.11e-22!14;UBERON:0003075!2.84e-21!86;UBERON:0007284!2.84e-21!86;UBERON:0002791!8.58e-21!33;UBERON:0000073!1.49e-20!94;UBERON:0001016!1.49e-20!94;UBERON:0007023!3.82e-20!115;UBERON:0002346!4.06e-20!90;UBERON:0002619!9.49e-19!22;UBERON:0003124!5.62e-18!7;UBERON:0001950!1.31e-16!20;UBERON:0000956!2.26e-16!25;UBERON:0000203!2.26e-16!25;UBERON:0003056!7.42e-16!61;UBERON:0000033!8.85e-15!123;UBERON:0004121!3.21e-14!169;UBERON:0000153!7.23e-14!129;UBERON:0007811!7.23e-14!129;UBERON:0000924!9.24e-14!173;UBERON:0006601!9.24e-14!173;UBERON:0000200!2.20e-12!6;UBERON:0000478!2.99e-12!24;UBERON:0001987!8.24e-12!4;UBERON:0004340!8.24e-12!4;UBERON:0003076!4.71e-11!15;UBERON:0003057!4.71e-11!15;UBERON:0000064!6.01e-10!219;UBERON:0004733!7.59e-10!12;UBERON:0002028!7.59e-10!12;UBERON:0007277!7.59e-10!12;UBERON:0001871!1.54e-09!7;UBERON:0004732!4.55e-09!13;UBERON:0002308!1.38e-08!9;UBERON:0000125!1.38e-08!9;UBERON:0000476!6.75e-08!3;UBERON:0000920!6.75e-08!3;UBERON:0000025!1.15e-07!194;UBERON:0000305!4.83e-07!7;UBERON:0002771!5.65e-07!3;UBERON:0001896!6.20e-07!3;UBERON:0005290!6.20e-07!3;UBERON:0010096!6.20e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.76e-45;6!UBERON:0002680;2.66e-30;9!UBERON:0001895;2.66e-30;9!UBERON:0003124;4.09e-23;3!UBERON:0000920;4.09e-23;3!UBERON:0004733;4.59e-23;12!UBERON:0002028;4.59e-23;12!UBERON:0004732;2.16e-21;13!UBERON:0005631;6.56e-08;10!UBERON:0000158;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0002680,2.66e-30,9;UBERON:0001895,2.66e-30,9;UBERON:0010092,2.66e-30,9;UBERON:0000920,4.09e-23,3;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0003124,9.89e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.890894042497916,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32216445855572,9.75307142546707,0,0,0,0,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@SLC1A6 | |||
}} |
Revision as of 21:51, 20 January 2014
Short description: | p6@SLC1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC1A6_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -3bp_to_ENST00000544886_5end |
EntrezGene: | SLC1A6 |
HGNC: | 10944 |
UniProt: | Q8N753 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
egg chorion | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
chorion | 9.89e-11 | 7 |