FFCP PHASE1:Hg19::chr19:15590280..15590296,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114770 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30013 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PD5 | |||
|association_with_transcript=18bp_to_NM_052890,uc002nbf.3,uc002nbg.3_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_PGLYRP2_5end | |||
|id=chr19:15590280..15590296,- | |||
|ontology_enrichment_celltype=CL:0000181!2.68e-19!12;CL:0000417!2.68e-19!12;CL:0000668!2.68e-19!12;CL:0000414!2.68e-19!12;CL:0000412!2.68e-19!12;CL:0000182!2.68e-19!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.08e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.08e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.15e-09;10!UBERON:0005564;1.15e-09;10!UBERON:0004161;5.31e-09;11!UBERON:0009497;9.35e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.89e-27!19;UBERON:0006925!8.89e-27!19;UBERON:0008836!8.89e-27!19;UBERON:0005057!2.78e-26!26;UBERON:0008835!4.15e-23!22;UBERON:0003894!4.15e-23!22;UBERON:0009854!4.26e-22!23;UBERON:0007499!2.57e-20!25;UBERON:0009497!2.57e-20!25;UBERON:0000015!2.57e-20!25;UBERON:0002423!2.57e-20!25;UBERON:0006235!2.57e-20!25;UBERON:0004161!2.57e-20!25;UBERON:0009856!1.58e-19!26;UBERON:0002365!2.39e-16!31;UBERON:0002330!2.39e-16!31;UBERON:0002368!1.87e-14!35;UBERON:0005172!3.39e-12!55;UBERON:0005173!3.39e-12!55;UBERON:0000949!3.47e-11!45;UBERON:0002417!6.01e-11!61;UBERON:0000916!6.01e-11!61;UBERON:0003929!2.84e-09!54;UBERON:0002530!1.84e-08!59;UBERON:0000466!3.02e-08!126;UBERON:0000473!5.00e-08!8;UBERON:0009569!2.49e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.94e-29;19!UBERON:0006925;3.94e-29;19!UBERON:0002423;3.18e-22;25!UBERON:0002365;6.20e-18;31!UBERON:0002330;6.20e-18;31!UBERON:0002368;1.60e-15;33!UBERON:0000473;7.68e-12;8!UBERON:0000949;2.67e-11;43!UBERON:0003135;7.16e-09;11!UBERON:0005172;3.35e-08;52!UBERON:0005173;3.35e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.83e-29,19;UBERON:0006925,3.83e-29,19;UBERON:0008836,3.83e-29,19;UBERON:0008835,3.21e-25,22;UBERON:0003894,3.21e-25,22;UBERON:0009854,3.88e-24,23;UBERON:0007499,3.11e-22,25;UBERON:0009497,3.11e-22,25;UBERON:0000015,3.11e-22,25;UBERON:0002423,3.11e-22,25;UBERON:0006235,3.11e-22,25;UBERON:0004161,3.11e-22,25;UBERON:0009856,2.17e-21,26;UBERON:0002365,5.47e-18,31;UBERON:0002330,5.47e-18,31;UBERON:0002368,5.81e-16,35;UBERON:0000949,1.83e-12,45;UBERON:0000473,7.68e-12,8;UBERON:0003929,2.04e-10,54;UBERON:0005172,2.04e-10,54;UBERON:0005173,2.04e-10,54;UBERON:0002530,1.52e-09,59;UBERON:0002417,2.18e-09,60;UBERON:0000916,2.18e-09,60;UBERON:0003135,7.16e-09,11;UBERON:0005911,6.77e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.434463580514,5.89696330006576,15.9513274803979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2382590616468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0170477569094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4655814434384,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06090177505535,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PGLYRP2 | |||
}} |
Revision as of 21:53, 20 January 2014
Short description: | p3@PGLYRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PGLYRP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 18bp_to_NM_052890, uc002nbf.3, uc002nbg.3_5end |
EntrezGene: | PGLYRP2 |
HGNC: | 30013 |
UniProt: | Q96PD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.08e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.83e-29 | 19 |
digestive gland | 3.83e-29 | 19 |
liver bud | 3.83e-29 | 19 |
hepatic diverticulum | 3.21e-25 | 22 |
liver primordium | 3.21e-25 | 22 |
digestive tract diverticulum | 3.88e-24 | 23 |
epithelial sac | 3.11e-22 | 25 |
epithelium of foregut-midgut junction | 3.11e-22 | 25 |
anatomical boundary | 3.11e-22 | 25 |
hepatobiliary system | 3.11e-22 | 25 |
foregut-midgut junction | 3.11e-22 | 25 |
septum transversum | 3.11e-22 | 25 |
sac | 2.17e-21 | 26 |
exocrine gland | 5.47e-18 | 31 |
exocrine system | 5.47e-18 | 31 |
endocrine gland | 5.81e-16 | 35 |
endocrine system | 1.83e-12 | 45 |
testis | 7.68e-12 | 8 |
gut epithelium | 2.04e-10 | 54 |
abdomen element | 2.04e-10 | 54 |
abdominal segment element | 2.04e-10 | 54 |
gland | 1.52e-09 | 59 |
abdominal segment of trunk | 2.18e-09 | 60 |
abdomen | 2.18e-09 | 60 |
male reproductive organ | 7.16e-09 | 11 |
endo-epithelium | 6.77e-07 | 82 |