FFCP PHASE1:Hg19::chr2:87755193..87755203,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:87755193..87755203,+ | |||
|id=chr2:87755193..87755203,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.22e-53!42;CL:0000860!4.00e-49!45;CL:0002194!2.75e-33!63;CL:0000576!2.75e-33!63;CL:0000040!2.75e-33!63;CL:0000559!2.75e-33!63;CL:0000839!7.65e-33!70;CL:0002009!3.77e-32!65;CL:0000766!7.55e-30!76;CL:0000557!4.07e-29!71;CL:0000763!5.14e-21!112;CL:0000049!5.14e-21!112;CL:0002031!9.74e-17!124;CL:0002087!9.00e-16!119;CL:0000738!2.74e-14!140;CL:0002032!7.82e-13!165;CL:0000837!7.82e-13!165;CL:0000037!3.96e-12!172;CL:0000566!3.96e-12!172;CL:0000988!3.24e-11!182;CL:0000342!5.50e-07!1;CL:0002565!5.50e-07!1;CL:0000048!9.46e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-18;33!CL:0002057;2.31e-18;33!CL:0000473;7.80e-13;39!CL:0000234;7.80e-13;39!CL:1000306;2.80e-11;4!CL:0002547;2.80e-11;4!CL:0000576;4.24e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.75e-16,42;CL:0002057,9.75e-16,42;CL:0000473,7.29e-14,48;CL:0000234,7.29e-14,48;CL:1000306,2.80e-11,4;CL:0002547,2.80e-11,4;CL:0002194,3.12e-11,59;CL:0000576,3.12e-11,59;CL:0000040,3.12e-11,59;CL:0000559,3.12e-11,59;CL:0002009,6.84e-11,61;CL:0000839,3.97e-10,66;CL:0000557,5.47e-10,67;CL:0000766,2.39e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;6.29e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.07e-25!80;UBERON:0001474!2.30e-23!86;UBERON:0004765!2.64e-19!101;UBERON:0001434!2.64e-19!101;UBERON:0002390!4.48e-19!102;UBERON:0003061!4.48e-19!102;UBERON:0002193!5.56e-19!112;UBERON:0002405!2.24e-18!115;UBERON:0002204!3.89e-14!167;UBERON:0003081!4.88e-11!216;UBERON:0002506!5.50e-07!1;UBERON:0001769!5.50e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.80e-11;4!UBERON:0000415;2.80e-11;4!UBERON:0007240;2.80e-11;4!UBERON:0005742;2.80e-11;4!UBERON:0005734;2.80e-11;4!UBERON:0004664;2.80e-11;4!UBERON:0004663;2.80e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.80e-11,4;UBERON:0007240,2.80e-11,4;UBERON:0005742,2.80e-11,4;UBERON:0005734,2.80e-11,4;UBERON:0004664,2.80e-11,4;UBERON:0004663,2.80e-11,4;UBERON:0002371,6.78e-09,76;UBERON:0001474,2.69e-08,82;UBERON:0004765,1.28e-07,90;UBERON:0002405,2.15e-07,93;UBERON:0002390,4.76e-07,98;UBERON:0003061,4.76e-07,98;UBERON:0004797,5.38e-07,7;UBERON:0001434,6.41e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.945928919554341,0.689491361473237,0,4.06279459783025,0.188242339542605,0.272906150057846,0,0.918251677112708,0.962787081228281,0,0.659702600373432,0.199463657621632,0,0.290209238628584,0.56738522469114,2.4912889959823,0.251248665256743,0.521482918420201,1.3031330682307,0,1.47311054395026,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17782033951725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:87755193..87755203,+ | |||
}} |
Revision as of 04:20, 21 January 2014
Short description: | p@chr2:87755193..87755203, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:87755193..87755203, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.75e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.75e-16 | 42 |
defensive cell | 7.29e-14 | 48 |
phagocyte | 7.29e-14 | 48 |
fibroblast of tunica adventitia of artery | 2.80e-11 | 4 |
fibroblast of the aortic adventitia | 2.80e-11 | 4 |
monopoietic cell | 3.12e-11 | 59 |
monocyte | 3.12e-11 | 59 |
monoblast | 3.12e-11 | 59 |
promonocyte | 3.12e-11 | 59 |
macrophage dendritic cell progenitor | 6.84e-11 | 61 |
myeloid lineage restricted progenitor cell | 3.97e-10 | 66 |
granulocyte monocyte progenitor cell | 5.47e-10 | 67 |
myeloid leukocyte | 2.39e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.80e-11 | 4 |
tunica adventitia of artery | 2.80e-11 | 4 |
adventitia | 2.80e-11 | 4 |
tunica adventitia of blood vessel | 2.80e-11 | 4 |
aorta tunica adventitia | 2.80e-11 | 4 |
aorta wall | 2.80e-11 | 4 |
bone marrow | 6.78e-09 | 76 |
bone element | 2.69e-08 | 82 |
skeletal element | 1.28e-07 | 90 |
immune system | 2.15e-07 | 93 |
hematopoietic system | 4.76e-07 | 98 |
blood island | 4.76e-07 | 98 |
blood vessel layer | 5.38e-07 | 7 |
skeletal system | 6.41e-07 | 100 |