FFCP PHASE1:Hg19::chr2:97725647..97725653,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000411475_5end | |||
|coexpression_cluster_id=C1099 | |||
|description=CAGE_peak_1_at_ENST00000411475_5end | |||
|id=chr2:97725647..97725653,+ | |||
|ontology_enrichment_celltype=CL:0000236!5.44e-14!14;CL:0000945!1.56e-10!24;CL:0000826!1.56e-10!24;CL:0000946!3.13e-07!1;CL:0000786!3.13e-07!1;CL:0000980!3.13e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000946;9.99e-30;1!CL:0000786;9.99e-30;1!CL:0002619;6.73e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.99e-30,1;CL:0000786,9.99e-30,1;CL:0000980,9.99e-30,1;CL:0000785,1.33e-15,2;CL:0000955,1.33e-15,2;CL:0000818,1.33e-15,2;CL:0000954,1.33e-15,2;CL:0000816,1.33e-15,2;CL:0002619,6.73e-11,3;CL:0000817,7.42e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.16e-29;1!CL:0000954;1.33e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.48e-18!115;UBERON:0001044!8.36e-09!6;UBERON:0003293!8.36e-09!6;UBERON:0003294!8.36e-09!6;UBERON:0010047!8.36e-09!6;UBERON:0000167!8.36e-09!6;UBERON:0002372!3.52e-07!1;UBERON:0001961!3.52e-07!1;UBERON:0001744!3.52e-07!1;UBERON:0001735!3.52e-07!1;UBERON:0000029!3.73e-07!1;UBERON:0001154!3.95e-07!1;UBERON:0001153!3.95e-07!1;UBERON:0001831!6.60e-07!1;UBERON:0001567!6.60e-07!1;UBERON:0008801!6.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.54e-29;1!UBERON:0001961;1.54e-29;1!UBERON:0001744;1.54e-29;1!UBERON:0001042;1.54e-29;1!UBERON:0001735;1.54e-29;1!UBERON:0000029;3.16e-29;1!UBERON:0001154;3.16e-29;1!UBERON:0001153;3.16e-29;1!UBERON:0009854;3.16e-29;1!UBERON:0006562;1.66e-15;2!UBERON:0001155;1.53e-13;9!UBERON:0002465;2.74e-12;10!UBERON:0000059;2.90e-11;11!UBERON:0002106;1.09e-10;3!UBERON:0002405;4.12e-10;27!UBERON:0009856;2.43e-08;4!UBERON:0004921;2.14e-07;33!UBERON:0000160;3.00e-07;17!UBERON:0004177;6.39e-07;5!UBERON:0005057;6.39e-07;5!UBERON:0004907;6.39e-07;5!UBERON:0002193;7.80e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.78e-29,1;UBERON:0001961,1.78e-29,1;UBERON:0001744,1.78e-29,1;UBERON:0001735,1.78e-29,1;UBERON:0000029,2.37e-29,1;UBERON:0001154,3.16e-29,1;UBERON:0001153,3.16e-29,1;UBERON:0001045,3.16e-29,1;UBERON:0001155,1.49e-13,9;UBERON:0002465,2.66e-12,10;UBERON:0000059,2.83e-11,11;UBERON:0002106,1.20e-10,3;UBERON:0004854,1.20e-10,3;UBERON:0009034,1.20e-10,3;UBERON:0002095,1.20e-10,3;UBERON:0004782,1.20e-10,3;UBERON:0003281,1.20e-10,3;UBERON:0009664,1.20e-10,3;UBERON:0002296,1.20e-10,3;UBERON:0005602,1.20e-10,3;UBERON:0001179,1.20e-10,3;UBERON:0006293,1.20e-10,3;UBERON:0005409,1.82e-10,25;UBERON:0000160,2.95e-07,17;UBERON:0004907,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,8.42123531649347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4768118060935,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,1.48849806543585,0.988058159489721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,3.11131766400604,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,1.31577485171795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0,0,0,0,0,2.08791364345221,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p1@ENST00000411475 | |||
}} |
Revision as of 04:31, 21 January 2014
Short description: | p1@ENST00000411475 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000411475_5end |
Coexpression cluster: | C1099_CD14_Macrophage_plasma_lymph_Mast_colon_spleen |
Association with transcript: | -22bp_to_ENST00000411475_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.99e-30 | 1 |
plasma cell | 9.99e-30 | 1 |
plasmablast | 9.99e-30 | 1 |
mature B cell | 1.33e-15 | 2 |
pre-B-II cell | 1.33e-15 | 2 |
transitional stage B cell | 1.33e-15 | 2 |
small pre-B-II cell | 1.33e-15 | 2 |
immature B cell | 1.33e-15 | 2 |
adult endothelial progenitor cell | 6.73e-11 | 3 |
precursor B cell | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.78e-29 | 1 |
mucosa-associated lymphoid tissue | 1.78e-29 | 1 |
lymphoid tissue | 1.78e-29 | 1 |
tonsillar ring | 1.78e-29 | 1 |
lymph node | 2.37e-29 | 1 |
vermiform appendix | 3.16e-29 | 1 |
caecum | 3.16e-29 | 1 |
midgut | 3.16e-29 | 1 |
colon | 1.49e-13 | 9 |
lymphoid system | 2.66e-12 | 10 |
large intestine | 2.83e-11 | 11 |
spleen | 1.20e-10 | 3 |
gastrointestinal system mesentery | 1.20e-10 | 3 |
stomach region | 1.20e-10 | 3 |
mesentery | 1.20e-10 | 3 |
gastrointestinal system serosa | 1.20e-10 | 3 |
mesentery of stomach | 1.20e-10 | 3 |
gut mesentery | 1.20e-10 | 3 |
dorsal mesentery | 1.20e-10 | 3 |
dorsal mesogastrium | 1.20e-10 | 3 |
peritoneal cavity | 1.20e-10 | 3 |
spleen primordium | 1.20e-10 | 3 |
gastrointestinal system | 1.82e-10 | 25 |
intestine | 2.95e-07 | 17 |
lower digestive tract | 6.39e-07 | 5 |