FFCP PHASE1:Hg19::chr2:149862509..149862533,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C541 | |||
|description=CAGE_peak_at_chr2:149862509..149862533,+ | |||
|id=chr2:149862509..149862533,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.97e-34;1!UBERON:0009847;2.74e-12;3!UBERON:0003353;2.74e-12;3 | |||
|ontology_enrichment_disease=DOID:5093!1.48e-11!4;DOID:1612!1.48e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.69e-34;4!DOID:1612;7.69e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.36e-34,4;DOID:1612,8.36e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.78e-28!115;UBERON:0001049!1.12e-15!57;UBERON:0005068!1.12e-15!57;UBERON:0006241!1.12e-15!57;UBERON:0007135!1.12e-15!57;UBERON:0002616!5.18e-13!59;UBERON:0001017!1.10e-12!82;UBERON:0003075!4.15e-12!86;UBERON:0007284!4.15e-12!86;UBERON:0002308!5.26e-12!9;UBERON:0000125!5.26e-12!9;UBERON:0005743!6.32e-12!86;UBERON:0000073!7.39e-12!94;UBERON:0001016!7.39e-12!94;UBERON:0002346!2.11e-11!90;UBERON:0000955!1.69e-10!69;UBERON:0006238!1.69e-10!69;UBERON:0000369!2.23e-10!4;UBERON:0002435!2.23e-10!4;UBERON:0000204!2.23e-10!4;UBERON:0010082!2.23e-10!4;UBERON:0003076!2.65e-10!15;UBERON:0003057!2.65e-10!15;UBERON:0009663!2.95e-10!7;UBERON:0002360!1.42e-09!2;UBERON:0000094!1.42e-09!2;UBERON:0007645!1.42e-09!2;UBERON:0004733!3.47e-09!12;UBERON:0002028!3.47e-09!12;UBERON:0007277!3.47e-09!12;UBERON:0002298!4.34e-09!8;UBERON:0001869!5.13e-09!32;UBERON:0004732!1.86e-08!13;UBERON:0002020!1.90e-08!34;UBERON:0003528!1.90e-08!34;UBERON:0002780!1.97e-08!41;UBERON:0001890!1.97e-08!41;UBERON:0006240!1.97e-08!41;UBERON:0001893!2.04e-08!34;UBERON:0003080!3.40e-08!42;UBERON:0002420!5.37e-08!9;UBERON:0007245!5.37e-08!9;UBERON:0010009!5.37e-08!9;UBERON:0010011!5.37e-08!9;UBERON:0000454!5.37e-08!9;UBERON:0002106!2.48e-07!3;UBERON:0004854!2.48e-07!3;UBERON:0009034!2.48e-07!3;UBERON:0002095!2.48e-07!3;UBERON:0004782!2.48e-07!3;UBERON:0003281!2.48e-07!3;UBERON:0009664!2.48e-07!3;UBERON:0002296!2.48e-07!3;UBERON:0005602!2.48e-07!3;UBERON:0001179!2.48e-07!3;UBERON:0006293!2.48e-07!3;UBERON:0001896!3.81e-07!3;UBERON:0005290!3.81e-07!3;UBERON:0010096!3.81e-07!3;UBERON:0006947!5.48e-07!3;UBERON:0004054!5.48e-07!3;UBERON:0002791!6.44e-07!33;UBERON:0005383!7.38e-07!3;UBERON:0005382!7.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;5.97e-34;1!UBERON:0000310;3.14e-14;10!UBERON:0001443;4.95e-13;11!UBERON:0002106;2.74e-12;3!UBERON:0000077;1.02e-11;27!UBERON:0001911;1.50e-09;4!UBERON:0004177;6.78e-08;5!UBERON:0005057;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,5.05e-34,1;UBERON:0000310,3.25e-14,10;UBERON:0001443,5.10e-13,11;UBERON:0002106,3.24e-12,3;UBERON:0004854,3.24e-12,3;UBERON:0009034,3.24e-12,3;UBERON:0002095,3.24e-12,3;UBERON:0004782,3.24e-12,3;UBERON:0003281,3.24e-12,3;UBERON:0009664,3.24e-12,3;UBERON:0002296,3.24e-12,3;UBERON:0005602,3.24e-12,3;UBERON:0001179,3.24e-12,3;UBERON:0006293,3.24e-12,3;UBERON:0000077,5.69e-11,29;UBERON:0000162,1.90e-10,14;UBERON:0001353,1.90e-10,14;UBERON:0000163,1.90e-10,14;UBERON:0006866,1.90e-10,14;UBERON:0000164,1.90e-10,14;UBERON:0000931,1.90e-10,14;UBERON:0004122,8.10e-10,15;UBERON:0001911,1.57e-09,4;UBERON:0005333,1.57e-09,4;UBERON:0008425,1.57e-09,4;UBERON:0005311,1.57e-09,4;UBERON:0005153,8.39e-09,37;UBERON:0001046,5.94e-08,19;UBERON:0005157,4.50e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0.520855522170466,1.31189999994294,0,0,0,10.8738333613251,0,0,0,0,0.241192877250816,0,0.442317039724898,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.551639951094387,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0,0,0,1.33438257845874,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.392616934229891,0,0,0,1.03382309777839,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,1.33151354837103,0,0 | |||
|short_description=p@chr2:149862509..149862533,+ | |||
}} |
Revision as of 05:53, 21 January 2014
Short description: | p@chr2:149862509..149862533, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:149862509..149862533, + |
Coexpression cluster: | C541_bronchogenic_anaplastic_cervical_Hep2_small_testicular_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
vagina | 5.05e-34 | 1 |
breast | 3.25e-14 | 10 |
chest | 5.10e-13 | 11 |
spleen | 3.24e-12 | 3 |
gastrointestinal system mesentery | 3.24e-12 | 3 |
stomach region | 3.24e-12 | 3 |
mesentery | 3.24e-12 | 3 |
gastrointestinal system serosa | 3.24e-12 | 3 |
mesentery of stomach | 3.24e-12 | 3 |
gut mesentery | 3.24e-12 | 3 |
dorsal mesentery | 3.24e-12 | 3 |
dorsal mesogastrium | 3.24e-12 | 3 |
peritoneal cavity | 3.24e-12 | 3 |
spleen primordium | 3.24e-12 | 3 |
mixed endoderm/mesoderm-derived structure | 5.69e-11 | 29 |
cloaca | 1.90e-10 | 14 |
anal region | 1.90e-10 | 14 |
embryonic cloaca | 1.90e-10 | 14 |
terminal part of digestive tract | 1.90e-10 | 14 |
primitive urogenital sinus | 1.90e-10 | 14 |
proctodeum | 1.90e-10 | 14 |
genitourinary system | 8.10e-10 | 15 |
mammary gland | 1.57e-09 | 4 |
mammary bud | 1.57e-09 | 4 |
mammary ridge | 1.57e-09 | 4 |
mammary placode | 1.57e-09 | 4 |
epithelial bud | 8.39e-09 | 37 |
hindgut | 5.94e-08 | 19 |
epithelial fold | 4.50e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.36e-34 | 4 |
breast cancer | 8.36e-34 | 4 |