FFCP PHASE1:Hg19::chr2:220404988..220405027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24291 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IZ52 | |||
|association_with_transcript=55bp_to_AK026331_5end | |||
|description=CAGE_peak_4_at_CHPF_5end | |||
|id=chr2:220404988..220405027,- | |||
|ontology_enrichment_celltype=CL:0000055!9.76e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.05e-08;13!CL:0002577;2.33e-08;3!CL:0002541;8.59e-08;3!CL:0002559;1.91e-07;5!CL:0000349;7.91e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.92e-08,3;CL:0002541,7.83e-08,3;CL:0002559,1.26e-07,5;CL:0000136,1.53e-07,15;CL:0000349,5.68e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.95e-09;3!DOID:127;7.95e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.21e-09,3;DOID:127,7.21e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.93e-10;4!UBERON:0003124;8.59e-08;3!UBERON:0000920;8.59e-08;3!UBERON:0002073;1.91e-07;5!UBERON:0003688;5.45e-07;6!UBERON:0002358;5.45e-07;6!UBERON:0003684;5.45e-07;6!UBERON:0001178;5.45e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.58e-16,7;UBERON:0001987,3.62e-10,4;UBERON:0004340,3.62e-10,4;UBERON:0005631,9.15e-10,14;UBERON:0000158,9.15e-10,14;UBERON:0004923,3.33e-08,66;UBERON:0000920,7.83e-08,3;UBERON:0002073,1.26e-07,5;UBERON:0005086,1.26e-07,5;UBERON:0005156,1.82e-07,59;UBERON:0000990,1.82e-07,59;UBERON:0003688,5.70e-07,6;UBERON:0002358,5.70e-07,6;UBERON:0003684,5.70e-07,6;UBERON:0001178,5.70e-07,6 | |||
|phase1_expression=2.36181893051724,1.49870366723688,1.40954404095971,0,2.23480547213644,2.61701557230111,0,4.42203911398782,2.61185628199839,0.245733936501509,0.697801167972428,0.436882744260345,1.31883489114227,0.495065411840187,0,0,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0.313454721478088,1.14494394852423,0.273748850145768,0,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.739508020333575,0,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.44575660953827,0.50133791063589,0.579386075843295,0,0,0.378139268656271,0,0.351339142772504,0.392937226493138,0.728590576585084,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.2663051166458,0.264818361626438,1.14734648299525,0.354668382198357,0.560677600142307,0,1.2333377420858,0.311211035399766,0,0.163461903113459,0.605429710579726,0,0,2.49728061464256,0,0.448346041655403,0.117434498643765,0,0,0.204154171254893,0,0.309977343527296,1.18800285728205,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0.717558542755448,0.213557388818567,0,0.300091096084402,0.309157587715317,0,1.30281799432113,0.337552664482532,0.68205903612839,0,0.276149695926898,0.323292113637624,0.710019185033229,0.604512589365842,0,0.386521706326594,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,1.28648187638577,1.38134921352481,1.39310378409594,1.44375896333917,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.368965315629341,0.514703430895577,0.878002283269004,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0.503946384596579,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0.380987365753014,2.67391897890794,1.17217447210047,0,0.616964956219941,0.600686115687835,0.285826432630578,0.112131084345361,0.43596006883328,0.22001485746285,0.904902010304444,0,0,0.26593811658487,0,0,0,0.532844358032199,0.285955987316295,1.62786481617433,0,0,1.06617584622764,0.791951872933429,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0.718874566474748,0,0,0,0.410952645100767,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0,0.542530047399471,0.623912584592421,1.24900292158013,1.26161932027148,0.117141414992713,1.20378439891088,2.27407504055985,2.0694614258501,1.32845119707087,0.368738337083406,0.695068915744663,1.37060810223918,1.37257369524342,0,0,0,1.5156378572313,3.32870879020994,2.11673205330776,2.48107807818777,0.61384789315225,2.80660094433074,2.05022638809122,0,2.57366273829772,1.48418066444991,0.771048469013278,0.532685175939381,0.164254312027618,0,0.348631135379878,0.966875596732978,2.40607764363942,1.01289087829486,0.229628896329213,0.364182336013434,1.04899531967539,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,2.92840555197873,0.824328093181778,0.54941678891006,0.165018999841176,0,1.30012049207304,1.6068392984416,0.676695028044854,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0.170453254832202,0.534192213880424,0.661139661443912,0.384380134730212,0,0.708104465988849,0,2.83331112147576,0,0,1.06461206063404,1.73986598415015,1.48259375283136,0.143124886741991,0,0.316379424718726,0.38126038784765,0.255897791311334,0,1.59101623962968,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,3.17020642346017,0.421258456238981,0,2.19342140668156,1.05650146756755,0.136499911407986,1.1312434556297,0,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0.608731130888112,0.30982349809975,0.563391205064483,0.143411352204052,0.294747123039363,0.35667105148125,0,0.422215270595328,0.658589785919804,0,0,0.288666338176536,1.34060455107157,2.17781969722645,1.31801321087491,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0.71623345421307,0.593929361665277,0,0,0.281338832821026,0.111308705022906,0,0,0.996239941255349,0.276283915531148,0.251932747854276,0.102268682502155,0,1.55519793830904,0.0898683511473268,0,0,0.295930216910801,0,1.11136990144637,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0.227884111694002,0.23056390438806,0.628303510868405,0.108647371922008,1.27600463892768,1.55715908783166,2.13213910407454,0,0,0,0,0.196062534317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| |||
|short_description=p4@CHPF | |||
}} |
Revision as of 08:49, 21 January 2014
Short description: | p4@CHPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHPF_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_AK026331_5end |
EntrezGene: | CHPF |
HGNC: | 24291 |
UniProt: | Q8IZ52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.92e-08 | 3 |
chorionic membrane mesenchymal stem cell | 7.83e-08 | 3 |
hair follicle cell | 1.26e-07 | 5 |
fat cell | 1.53e-07 | 15 |
extraembryonic cell | 5.68e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.58e-16 | 7 |
placenta | 3.62e-10 | 4 |
allantois | 3.62e-10 | 4 |
extraembryonic membrane | 9.15e-10 | 14 |
membranous layer | 9.15e-10 | 14 |
organ component layer | 3.33e-08 | 66 |
egg chorion | 7.83e-08 | 3 |
hair follicle | 1.26e-07 | 5 |
hair follicle placode | 1.26e-07 | 5 |
reproductive structure | 1.82e-07 | 59 |
reproductive system | 1.82e-07 | 59 |
omentum | 5.70e-07 | 6 |
peritoneum | 5.70e-07 | 6 |
abdominal cavity | 5.70e-07 | 6 |
visceral peritoneum | 5.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.21e-09 | 3 |
leiomyoma | 7.21e-09 | 3 |