FFCP PHASE1:Hg19::chr21:44590245..44590255,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1409 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2388 | |||
|TSSclassifier=strong | |||
|UniProt=E9PHE4 | |||
|association_with_transcript=-10bp_to_ENST00000398132_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_8_at_CRYAA_5end | |||
|id=chr21:44590245..44590255,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.59e-20!12;CL:0000417!2.59e-20!12;CL:0000668!2.59e-20!12;CL:0000414!2.59e-20!12;CL:0000412!2.59e-20!12;CL:0000182!2.59e-20!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.26e-37;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-37,12;CL:0000223,1.46e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.14e-41;11!UBERON:0009497;7.97e-35;13!UBERON:0001041;1.06e-15;30!UBERON:0003104;6.79e-15;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;8.49e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.67e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!4.36e-18!19;UBERON:0006925!4.36e-18!19;UBERON:0008836!4.36e-18!19;UBERON:0008835!1.44e-15!22;UBERON:0003894!1.44e-15!22;UBERON:0009854!7.14e-15!23;UBERON:0007499!1.19e-13!25;UBERON:0009497!1.19e-13!25;UBERON:0000015!1.19e-13!25;UBERON:0002423!1.19e-13!25;UBERON:0006235!1.19e-13!25;UBERON:0004161!1.19e-13!25;UBERON:0005057!4.15e-13!26;UBERON:0009856!4.15e-13!26;UBERON:0002368!7.85e-13!35;UBERON:0002365!6.36e-11!31;UBERON:0002330!6.36e-11!31;UBERON:0000949!8.07e-10!45;UBERON:0003929!4.64e-08!54;UBERON:0005172!5.93e-08!55;UBERON:0005173!5.93e-08!55;UBERON:0002530!2.59e-07!59;UBERON:0002417!4.27e-07!61;UBERON:0000916!4.27e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;4.31e-14;31!UBERON:0002330;4.31e-14;31!UBERON:0002368;2.79e-13;33!UBERON:0000949;2.20e-10;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.46e-24,19;UBERON:0006925,3.46e-24,19;UBERON:0008836,3.46e-24,19;UBERON:0008835,4.90e-21,22;UBERON:0003894,4.90e-21,22;UBERON:0009854,3.62e-20,23;UBERON:0007499,1.23e-18,25;UBERON:0009497,1.23e-18,25;UBERON:0000015,1.23e-18,25;UBERON:0002423,1.23e-18,25;UBERON:0006235,1.23e-18,25;UBERON:0004161,1.23e-18,25;UBERON:0009856,5.83e-18,26;UBERON:0002365,3.16e-15,31;UBERON:0002330,3.16e-15,31;UBERON:0002368,1.35e-13,35;UBERON:0000949,8.78e-11,45;UBERON:0003929,3.93e-09,54;UBERON:0005172,3.93e-09,54;UBERON:0005173,3.93e-09,54;UBERON:0002530,1.98e-08,59;UBERON:0002417,2.64e-08,60;UBERON:0000916,2.64e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38971111170799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04836273998782,1.2362378757175,2.15691340333392,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@CRYAA | |||
}} |
Revision as of 14:02, 21 January 2014
Short description: | p8@CRYAA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CRYAA_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -10bp_to_ENST00000398132_5end |
EntrezGene: | CRYAA |
HGNC: | 2388 |
UniProt: | E9PHE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-37 | 12 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.46e-24 | 19 |
digestive gland | 3.46e-24 | 19 |
liver bud | 3.46e-24 | 19 |
hepatic diverticulum | 4.90e-21 | 22 |
liver primordium | 4.90e-21 | 22 |
digestive tract diverticulum | 3.62e-20 | 23 |
epithelial sac | 1.23e-18 | 25 |
epithelium of foregut-midgut junction | 1.23e-18 | 25 |
anatomical boundary | 1.23e-18 | 25 |
hepatobiliary system | 1.23e-18 | 25 |
foregut-midgut junction | 1.23e-18 | 25 |
septum transversum | 1.23e-18 | 25 |
sac | 5.83e-18 | 26 |
exocrine gland | 3.16e-15 | 31 |
exocrine system | 3.16e-15 | 31 |
endocrine gland | 1.35e-13 | 35 |
endocrine system | 8.78e-11 | 45 |
gut epithelium | 3.93e-09 | 54 |
abdomen element | 3.93e-09 | 54 |
abdominal segment element | 3.93e-09 | 54 |
gland | 1.98e-08 | 59 |
abdominal segment of trunk | 2.64e-08 | 60 |
abdomen | 2.64e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.67e-12 | 39 |