FFCP PHASE1:Hg19::chr21:45627309..45627320,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_ENST00000423967_5end | |||
|coexpression_cluster_id=C650 | |||
|description=CAGE_peak_1_at_ENST00000423967_5end | |||
|id=chr21:45627309..45627320,- | |||
|ontology_enrichment_celltype=CL:0000945!2.29e-56!24;CL:0000826!2.29e-56!24;CL:0000542!2.31e-40!53;CL:0000051!2.31e-40!53;CL:0000838!6.41e-38!52;CL:0002087!8.54e-30!119;CL:0000738!9.83e-30!140;CL:0000236!5.50e-27!14;CL:0002031!2.06e-26!124;CL:0000037!3.76e-24!172;CL:0000566!3.76e-24!172;CL:0000988!2.43e-22!182;CL:0002032!2.89e-22!165;CL:0000837!2.89e-22!165;CL:0000784!5.57e-13!3;CL:0000785!6.73e-09!2;CL:0000955!6.73e-09!2;CL:0000818!6.73e-09!2;CL:0000954!6.73e-09!2;CL:0000816!6.73e-09!2;CL:0000134!9.75e-08!358;CL:0002320!2.00e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.69e-58;24!CL:0000784;7.49e-43;3!CL:0000236;1.04e-17;13!CL:0000946;5.98e-16;1!CL:0000786;5.98e-16;1!CL:0000542;2.22e-15;53!CL:0000451;3.31e-12;10!CL:0000771;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.08e-58,24;CL:0000826,3.08e-58,24;CL:0000784,4.49e-42,3;CL:0000838,1.93e-26,52;CL:0000542,6.34e-26,53;CL:0000051,6.34e-26,53;CL:0000236,1.70e-25,14;CL:0000738,5.24e-19,136;CL:0000946,6.44e-16,1;CL:0000786,6.44e-16,1;CL:0000980,6.44e-16,1;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177;CL:0002087,9.52e-14,115;CL:0002031,3.93e-13,120;CL:0000451,5.35e-12,10;CL:0002032,1.95e-11,161;CL:0000837,1.95e-11,161;CL:0000785,1.29e-08,2;CL:0000955,1.29e-08,2;CL:0000818,1.29e-08,2;CL:0000954,1.29e-08,2;CL:0000816,1.29e-08,2;CL:0000771,2.15e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.22e-15;53!CL:0000954;1.24e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!7.77e-18!10 | |||
|ontology_enrichment_disease_v019=DOID:630;5.98e-16;1!DOID:0050177;5.98e-16;1!DOID:0050427;5.98e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.56e-16,1;DOID:0050177,5.56e-16,1;DOID:0050427,5.56e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.48e-11!3;UBERON:0004854!2.48e-11!3;UBERON:0009034!2.48e-11!3;UBERON:0002095!2.48e-11!3;UBERON:0004782!2.48e-11!3;UBERON:0003281!2.48e-11!3;UBERON:0009664!2.48e-11!3;UBERON:0002296!2.48e-11!3;UBERON:0005602!2.48e-11!3;UBERON:0001179!2.48e-11!3;UBERON:0006293!2.48e-11!3;UBERON:0004177!2.54e-08!7;UBERON:0002384!5.35e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.88831355734875,1.41679406364623,0,0,0,0,0,0,1.23947520928483,0.426507697462265,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,1.70763890732835,1.17447437874188,1.52909291250092,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19245312152671,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07421177600403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | |||
|short_description=p1@ENST00000423967 | |||
}} |
Revision as of 14:09, 21 January 2014
Short description: | p1@ENST00000423967 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000423967_5end |
Coexpression cluster: | C650_CD19_B_lymphoma_xeroderma_splenic_Burkitt_plasma |
Association with transcript: | -27bp_to_ENST00000423967_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.08e-58 | 24 |
pro-B cell | 3.08e-58 | 24 |
plasmacytoid dendritic cell | 4.49e-42 | 3 |
lymphoid lineage restricted progenitor cell | 1.93e-26 | 52 |
lymphocyte | 6.34e-26 | 53 |
common lymphoid progenitor | 6.34e-26 | 53 |
B cell | 1.70e-25 | 14 |
leukocyte | 5.24e-19 | 136 |
antibody secreting cell | 6.44e-16 | 1 |
plasma cell | 6.44e-16 | 1 |
plasmablast | 6.44e-16 | 1 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
nongranular leukocyte | 9.52e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 3.93e-13 | 120 |
dendritic cell | 5.35e-12 | 10 |
hematopoietic oligopotent progenitor cell | 1.95e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-11 | 161 |
mature B cell | 1.29e-08 | 2 |
pre-B-II cell | 1.29e-08 | 2 |
transitional stage B cell | 1.29e-08 | 2 |
small pre-B-II cell | 1.29e-08 | 2 |
immature B cell | 1.29e-08 | 2 |
eosinophil | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.56e-16 | 1 |
monogenic disease | 5.56e-16 | 1 |
xeroderma pigmentosum | 5.56e-16 | 1 |