FFCP PHASE1:Hg19::chr22:30255054..30255065,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2642 | |||
|description=CAGE_peak_at_chr22:30255054..30255065,- | |||
|id=chr22:30255054..30255065,- | |||
|ontology_enrichment_celltype=CL:0000039!1.31e-15!7;CL:0000586!1.31e-15!7;CL:0002076!1.53e-09!43;CL:0002251!2.60e-09!21;CL:0000223!3.67e-09!59;CL:0002149!1.00e-08!6;CL:0002255!1.00e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002251;5.71e-21;20!CL:0002076;1.47e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,5.71e-21,20;CL:0002076,1.07e-10,42;CL:0000223,4.33e-08,58;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.52e-50;2!UBERON:0010056;4.52e-50;2 | |||
|ontology_enrichment_disease=DOID:305!2.36e-14!106;DOID:0050687!3.95e-12!143;DOID:3001!1.00e-08!6;DOID:1749!2.42e-08!14;DOID:4074!4.42e-07!2;DOID:4905!4.42e-07!2;DOID:3498!4.42e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.55e-29;14!DOID:7;1.59e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.55e-29,14;DOID:7,2.03e-11,39 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.27e-23!8;UBERON:0003135!2.82e-17!11;UBERON:0000997!2.32e-13!1;UBERON:0005056!2.32e-13!1;UBERON:0004176!2.61e-13!22;UBERON:0003343!4.24e-13!4;UBERON:0004785!4.24e-13!4;UBERON:0003133!2.31e-11!48;UBERON:0003729!1.16e-10!5;UBERON:0000991!3.60e-09!21;UBERON:0009196!3.60e-09!21;UBERON:0009117!3.60e-09!21;UBERON:0005564!3.60e-09!21;UBERON:0005156!3.97e-09!59;UBERON:0000990!3.97e-09!59;UBERON:0003101!9.21e-09!22;UBERON:0000079!9.21e-09!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.55e-98;4!UBERON:0004785;1.55e-98;4!UBERON:0000974;2.83e-66;6!UBERON:0001723;5.96e-34;3!UBERON:0001033;5.96e-34;3!UBERON:0003729;1.86e-31;13!UBERON:0000161;5.37e-22;19!UBERON:0000166;5.37e-22;19!UBERON:0000344;5.71e-21;20!UBERON:0000165;2.22e-15;28!UBERON:0001444;8.91e-10;48!UBERON:0007811;3.68e-09;52!UBERON:0000033;3.56e-08;50!UBERON:0004923;8.24e-08;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.55e-98,4;UBERON:0004785,1.55e-98,4;UBERON:0000974,2.00e-40,10;UBERON:0001723,5.96e-34,3;UBERON:0001033,5.96e-34,3;UBERON:0010056,5.96e-34,3;UBERON:0003729,1.86e-31,13;UBERON:0000344,5.71e-21,20;UBERON:0000166,3.41e-19,22;UBERON:0000165,6.74e-15,29;UBERON:0000930,6.74e-15,29;UBERON:0000161,2.91e-12,36;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0001444,2.38e-09,49;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62;UBERON:0004923,2.96e-07,66;UBERON:0008814,7.60e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.587954384486266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95257216008533,1.73288499225507,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0.50141507858475,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:30255054..30255065,- | |||
}} |
Revision as of 15:12, 21 January 2014
Short description: | p@chr22:30255054..30255065, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr22:30255054..30255065, - |
Coexpression cluster: | C2642_oral_Gingival_Bronchial_Tracheal_squamous_Small_Corneal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 5.71e-21 | 20 |
endo-epithelial cell | 1.07e-10 | 42 |
endodermal cell | 4.33e-08 | 58 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.55e-98 | 4 |
respiratory system mucosa | 1.55e-98 | 4 |
neck | 2.00e-40 | 10 |
tongue | 5.96e-34 | 3 |
gustatory system | 5.96e-34 | 3 |
future tongue | 5.96e-34 | 3 |
mouth mucosa | 1.86e-31 | 13 |
mucosa | 5.71e-21 | 20 |
oral opening | 3.41e-19 | 22 |
mouth | 6.74e-15 | 29 |
stomodeum | 6.74e-15 | 29 |
orifice | 2.91e-12 | 36 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
subdivision of head | 2.38e-09 | 49 |
head | 2.46e-08 | 56 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |
organ component layer | 2.96e-07 | 66 |
pharyngeal arch system | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.55e-29 | 14 |
disease of anatomical entity | 2.03e-11 | 39 |