FFCP PHASE1:Hg19::chr3:45635367..45635390,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8994 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6612 | |||
|TSSclassifier=weak | |||
|UniProt=C9JRJ5 | |||
|association_with_transcript=-425bp_to_ENST00000440097_5end | |||
|description=CAGE_peak_3_at_LIMD1_5end | |||
|id=chr3:45635367..45635390,+ | |||
|ontology_enrichment_celltype=CL:0000557!8.07e-08!71;CL:0002087!3.72e-07!119;CL:0002009!4.13e-07!65;CL:0002194!6.06e-07!63;CL:0000576!6.06e-07!63;CL:0000040!6.06e-07!63;CL:0000559!6.06e-07!63;CL:0000860!8.74e-07!45;CL:0000037!9.26e-07!172;CL:0000566!9.26e-07!172 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.49e-08,67;CL:0000473,2.22e-07,48;CL:0000234,2.22e-07,48;CL:0002009,4.15e-07,61;CL:0000037,5.23e-07,168;CL:0002194,6.16e-07,59;CL:0000576,6.16e-07,59;CL:0000040,6.16e-07,59;CL:0000559,6.16e-07,59;CL:0000988,6.45e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.70e-12!115;UBERON:0001474!2.87e-10!86;UBERON:0002371!4.19e-09!80;UBERON:0002193!9.74e-09!112;UBERON:0002390!2.35e-08!102;UBERON:0003061!2.35e-08!102;UBERON:0004765!3.57e-08!101;UBERON:0001434!3.57e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.58e-10,93;UBERON:0001474,1.93e-10,82;UBERON:0002371,3.67e-09,76;UBERON:0002193,1.37e-08,108;UBERON:0004765,1.70e-08,90;UBERON:0002390,2.10e-08,98;UBERON:0003061,2.10e-08,98;UBERON:0001434,8.90e-08,100 | |||
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| |||
|short_description=p3@LIMD1 | |||
}} |
Revision as of 18:33, 21 January 2014
Short description: | p3@LIMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -425bp_to_ENST00000440097_5end |
EntrezGene: | LIMD1 |
HGNC: | 6612 |
UniProt: | C9JRJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 5.49e-08 | 67 |
defensive cell | 2.22e-07 | 48 |
phagocyte | 2.22e-07 | 48 |
macrophage dendritic cell progenitor | 4.15e-07 | 61 |
hematopoietic stem cell | 5.23e-07 | 168 |
monopoietic cell | 6.16e-07 | 59 |
monocyte | 6.16e-07 | 59 |
monoblast | 6.16e-07 | 59 |
promonocyte | 6.16e-07 | 59 |
hematopoietic cell | 6.45e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.58e-10 | 93 |
bone element | 1.93e-10 | 82 |
bone marrow | 3.67e-09 | 76 |
hemolymphoid system | 1.37e-08 | 108 |
skeletal element | 1.70e-08 | 90 |
hematopoietic system | 2.10e-08 | 98 |
blood island | 2.10e-08 | 98 |
skeletal system | 8.90e-08 | 100 |