FFCP PHASE1:Hg19::chr3:124632009..124632024,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C124 | |||
|description=CAGE_peak_at_chr3:124632009..124632024,- | |||
|id=chr3:124632009..124632024,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.16e-29;1 | |||
|ontology_enrichment_disease=DOID:4960!2.50e-10!1;DOID:0070004!2.50e-10!1;DOID:2355!4.33e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.43e-15!27;UBERON:0005409!6.01e-12!35;UBERON:0001154!1.08e-10!1;UBERON:0001153!1.08e-10!1;UBERON:0001155!6.68e-10!9;UBERON:0000059!3.45e-08!11;UBERON:0004921!8.03e-07!129;UBERON:0004185!8.03e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.71e-56;17!UBERON:0002108;1.37e-51;4!UBERON:0005409;3.51e-44;22!UBERON:0001154;3.16e-29;1!UBERON:0001153;3.16e-29;1!UBERON:0009854;3.16e-29;1!UBERON:0001155;1.21e-28;9!UBERON:0004921;4.58e-27;33!UBERON:0000059;1.33e-23;11!UBERON:0001555;2.55e-12;54!UBERON:0002114;8.17e-11;2!UBERON:0001007;1.83e-08;81!UBERON:0009856;2.43e-08;4!UBERON:0000922;8.49e-08;49!UBERON:0004907;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.46e-56,17;UBERON:0002108,1.15e-51,4;UBERON:0005409,3.57e-39,25;UBERON:0001154,3.16e-29,1;UBERON:0001153,3.16e-29,1;UBERON:0001045,3.16e-29,1;UBERON:0001155,1.21e-28,9;UBERON:0000059,1.33e-23,11;UBERON:0002114,7.42e-11,2;UBERON:0004921,8.61e-09,118;UBERON:0001007,3.45e-07,145;UBERON:0001555,3.45e-07,145;UBERON:0007026,3.45e-07,145;UBERON:0004907,6.39e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.123084805461069,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,1.83309043480088,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0.102662806856247,0,0,0,0,0,0,0,0,2.46957305945423,6.77534637562268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:124632009..124632024,- | |||
}} |
Revision as of 21:03, 21 January 2014
Short description: | p@chr3:124632009..124632024, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:124632009..124632024, - |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.46e-56 | 17 |
small intestine | 1.15e-51 | 4 |
gastrointestinal system | 3.57e-39 | 25 |
vermiform appendix | 3.16e-29 | 1 |
caecum | 3.16e-29 | 1 |
midgut | 3.16e-29 | 1 |
colon | 1.21e-28 | 9 |
large intestine | 1.33e-23 | 11 |
duodenum | 7.42e-11 | 2 |
subdivision of digestive tract | 8.61e-09 | 118 |
digestive system | 3.45e-07 | 145 |
digestive tract | 3.45e-07 | 145 |
primitive gut | 3.45e-07 | 145 |
lower digestive tract | 6.39e-07 | 5 |