FFCP PHASE1:Hg19::chr3:147127961..147127972,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=61bp_to_AB464362_5end | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_3_at_AB464362_5end | |||
|id=chr3:147127961..147127972,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.06e-12!71;CL:0000133!2.13e-12!59;CL:0000064!1.17e-11!3;CL:0005012!1.17e-11!3;CL:0000067!1.17e-11!3;CL:0002304!1.17e-11!3;CL:0000708!1.30e-11!3;CL:0002590!2.19e-11!3;CL:0002603!2.61e-11!3;CL:0000243!4.85e-09!15;CL:0000125!4.85e-09!15;CL:0000030!4.85e-09!15;CL:0000339!4.85e-09!15;CL:0000333!5.61e-09!41;CL:0002559!6.76e-09!4;CL:0002319!8.16e-09!25;CL:0002575!9.91e-09!2;CL:0002549!1.77e-08!2;CL:0000128!4.39e-08!7;CL:0000126!4.39e-08!7;CL:0000127!4.39e-08!7;CL:0002453!4.39e-08!7;CL:0000095!5.56e-08!17;CL:0000123!5.56e-08!17 | |||
|ontology_enrichment_celltype_v019=CL:0002575;4.24e-32;2!CL:0002549;5.50e-31;2!CL:0000346;2.06e-21;3!CL:1000428;2.06e-21;3!CL:0000064;3.11e-21;3!CL:0000067;3.11e-21;3!CL:0005012;3.11e-21;3!CL:0002304;3.11e-21;3!CL:0000669;1.36e-16;4!CL:0002559;2.94e-13;5!CL:0000047;7.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,3.92e-32,2;CL:0002549,4.71e-31,2;CL:0000346,1.96e-21,3;CL:1000428,1.96e-21,3;CL:0000064,2.96e-21,3;CL:0000067,2.96e-21,3;CL:0005012,2.96e-21,3;CL:0002304,2.96e-21,3;CL:0000669,1.31e-16,4;CL:0002559,2.85e-13,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.85e-28!82;UBERON:0000955!1.31e-27!69;UBERON:0006238!1.31e-27!69;UBERON:0005743!8.17e-27!86;UBERON:0004733!2.33e-26!12;UBERON:0002028!2.33e-26!12;UBERON:0007277!2.33e-26!12;UBERON:0000073!2.08e-25!94;UBERON:0001016!2.08e-25!94;UBERON:0002200!4.35e-25!11;UBERON:0006876!4.35e-25!11;UBERON:0004732!3.57e-24!13;UBERON:0002616!8.61e-24!59;UBERON:0004121!5.31e-22!169;UBERON:0000924!2.80e-21!173;UBERON:0006601!2.80e-21!173;UBERON:0003076!1.12e-20!15;UBERON:0003057!1.12e-20!15;UBERON:0000033!9.40e-20!123;UBERON:0000153!1.76e-18!129;UBERON:0007811!1.76e-18!129;UBERON:0005284!3.82e-18!5;UBERON:0002680!8.67e-18!9;UBERON:0001895!8.67e-18!9;UBERON:0010092!8.67e-18!9;UBERON:0003075!4.54e-16!86;UBERON:0007284!4.54e-16!86;UBERON:0002346!4.22e-15!90;UBERON:0000488!1.16e-14!4;UBERON:0002037!2.22e-14!6;UBERON:0006215!2.22e-14!6;UBERON:0001049!5.41e-14!57;UBERON:0005068!5.41e-14!57;UBERON:0006241!5.41e-14!57;UBERON:0007135!5.41e-14!57;UBERON:0001778!1.17e-11!3;UBERON:0001775!1.17e-11!3;UBERON:0003210!1.30e-11!3;UBERON:0001896!1.34e-10!3;UBERON:0005290!1.34e-10!3;UBERON:0010096!1.34e-10!3;UBERON:0002298!3.51e-10!8;UBERON:0002203!8.83e-10!6;UBERON:0001768!8.83e-10!6;UBERON:0002073!6.76e-09!4;UBERON:0005086!6.76e-09!4;UBERON:0003947!1.77e-08!2;UBERON:0005629!1.77e-08!2;UBERON:0005358!1.77e-08!2;UBERON:0001886!1.77e-08!2;UBERON:0004086!1.77e-08!2;UBERON:0005282!1.77e-08!2;UBERON:0005281!1.77e-08!2;UBERON:0007625!5.15e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.83e-34;11!UBERON:0005629;5.50e-31;2!UBERON:0005358;5.50e-31;2!UBERON:0001886;5.50e-31;2!UBERON:0004086;5.50e-31;2!UBERON:0005282;5.50e-31;2!UBERON:0005281;5.50e-31;2!UBERON:0005284;6.09e-28;5!UBERON:0000412;2.06e-21;3!UBERON:0001992;2.06e-21;3!UBERON:0001778;3.11e-21;3!UBERON:0001775;3.11e-21;3!UBERON:0000488;3.45e-16;4!UBERON:0002073;2.94e-13;5!UBERON:0007625;4.03e-13;11!UBERON:0010371;2.37e-12;31!UBERON:0002203;4.05e-11;6!UBERON:0001768;4.05e-11;6!UBERON:0002200;4.05e-11;6!UBERON:0001801;1.93e-10;14!UBERON:0000019;7.72e-08;19!UBERON:0000047;7.72e-08;19!UBERON:0004088;7.72e-08;19!UBERON:0010230;7.72e-08;19!UBERON:0002067;9.05e-08;9!UBERON:0000970;1.79e-07;20!UBERON:0002104;3.84e-07;21!UBERON:0001456;3.84e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,1.71e-34,11;UBERON:0005629,4.71e-31,2;UBERON:0005358,4.71e-31,2;UBERON:0001886,4.71e-31,2;UBERON:0004086,4.71e-31,2;UBERON:0005282,4.71e-31,2;UBERON:0005281,4.71e-31,2;UBERON:0005284,5.82e-28,5;UBERON:0000412,1.96e-21,3;UBERON:0001992,1.96e-21,3;UBERON:0001778,2.96e-21,3;UBERON:0001775,2.96e-21,3;UBERON:0000488,3.32e-16,4;UBERON:0002073,2.85e-13,5;UBERON:0005086,2.85e-13,5;UBERON:0007625,4.11e-13,11;UBERON:0005085,2.28e-12,31;UBERON:0002203,3.95e-11,6;UBERON:0001768,3.95e-11,6;UBERON:0002200,3.95e-11,6;UBERON:0001801,1.97e-10,14;UBERON:0004121,8.52e-08,171;UBERON:0000924,8.52e-08,171;UBERON:0006601,8.52e-08,171;UBERON:0002067,8.90e-08,9;UBERON:0004016,8.90e-08,9;UBERON:0010083,8.90e-08,9;UBERON:0000019,1.81e-07,20;UBERON:0000047,1.81e-07,20;UBERON:0010312,1.81e-07,20;UBERON:0004088,1.81e-07,20;UBERON:0010230,1.81e-07,20;UBERON:0003072,1.81e-07,20;UBERON:0004128,1.81e-07,20;UBERON:0003071,1.81e-07,20;UBERON:0000970,3.89e-07,21;UBERON:0002104,3.89e-07,21;UBERON:0001456,7.78e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.738726348460727,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9305793320861,0.443458794925128,1.49319135678314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36221684880438,1.72852777344,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.518305275076852,0.252320850875628,0,1.56449532329816,5.78916844373597,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0,0,0,0,2.08674728955138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35475277125258,0.87192013766656,0.51336800074665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0.508189248444927,1.30139853857622,0,0,0,0,0,0,0.613457458595699,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,19.3843145888113,3.77457766191941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72158369359667,0.316379424718726,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.886642856860642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0.110929051536852,0.124192805882767,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.40781839786099,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@AB464362 | |||
}} |
Revision as of 21:51, 21 January 2014
Short description: | p3@AB464362 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB464362_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 61bp_to_AB464362_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 3.92e-32 | 2 |
fibroblast of choroid plexus | 4.71e-31 | 2 |
hair follicle dermal papilla cell | 1.96e-21 | 3 |
stem cell of epidermis | 1.96e-21 | 3 |
ciliated cell | 2.96e-21 | 3 |
ciliated epithelial cell | 2.96e-21 | 3 |
multi-ciliated epithelial cell | 2.96e-21 | 3 |
non-pigmented ciliary epithelial cell | 2.96e-21 | 3 |
pericyte cell | 1.31e-16 | 4 |
hair follicle cell | 2.85e-13 | 5 |