FFCP PHASE1:Hg19::chr3:149089649..149089663,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-326bp_to_AK023364_5end | |||
|description=CAGE_peak_3_at_AK023364_5end | |||
|id=chr3:149089649..149089663,- | |||
|ontology_enrichment_celltype=CL:0000222!1.22e-12!119;CL:0000066!5.44e-12!254;CL:0002139!1.70e-11!24;CL:0000213!6.36e-11!57;CL:0000215!6.36e-11!57;CL:0002078!6.78e-10!44;CL:0000115!2.86e-09!35;CL:0000220!2.49e-08!246;CL:0002321!4.75e-08!248;CL:0000071!9.17e-08!18;CL:0002546!9.17e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.46e-10;24!CL:0002545;2.50e-09;2!CL:0002078;5.10e-09;45!CL:0002595;2.32e-08;5!CL:0000115;5.34e-08;36!CL:0000071;6.70e-08;18!CL:0002144;9.41e-07;3!CL:0002564;9.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,5.61e-11,45;CL:0002139,4.54e-10,24;CL:0000115,7.59e-10,36;CL:0000213,1.55e-09,58;CL:0000215,1.55e-09,58;CL:0002545,2.86e-09,2;CL:0000066,4.35e-09,253;CL:0002595,3.05e-08,5;CL:0000071,5.49e-08,18;CL:0002546,5.49e-08,18;CL:0002144,6.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.01e-10;29!CL:0002546;6.70e-08;18 | |||
|ontology_enrichment_disease=DOID:305!7.06e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.94e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.59e-16!118;UBERON:0000477!9.17e-15!286;UBERON:0000055!1.06e-12!69;UBERON:0002049!1.14e-11!79;UBERON:0007798!1.14e-11!79;UBERON:0004111!1.19e-10!241;UBERON:0000926!3.06e-10!448;UBERON:0004120!3.06e-10!448;UBERON:0006603!3.06e-10!448;UBERON:0003104!4.28e-10!238;UBERON:0009142!4.28e-10!238;UBERON:0001981!5.97e-10!60;UBERON:0007500!5.97e-10!60;UBERON:0004537!5.97e-10!60;UBERON:0006965!5.97e-10!60;UBERON:0004872!6.03e-10!84;UBERON:0000490!9.30e-10!138;UBERON:0001737!3.35e-09!9;UBERON:0004535!4.08e-09!110;UBERON:0001009!5.88e-09!113;UBERON:0000487!2.10e-08!22;UBERON:0005256!3.47e-08!143;UBERON:0006914!7.33e-08!25;UBERON:0001986!9.17e-08!18;UBERON:0004638!9.17e-08!18;UBERON:0004852!9.17e-08!18;UBERON:0000481!9.72e-08!347;UBERON:0000025!1.59e-07!194;UBERON:0002100!1.86e-07!216;UBERON:0000483!3.96e-07!309;UBERON:0001637!4.21e-07!42;UBERON:0003509!4.21e-07!42;UBERON:0004572!4.21e-07!42;UBERON:0000119!4.65e-07!312;UBERON:0000467!9.51e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.80e-23;9!UBERON:0001557;7.80e-23;9!UBERON:0006914;1.54e-09;25!UBERON:0005800;2.50e-09;2!UBERON:0001515;2.50e-09;2!UBERON:0000487;1.71e-08;22!UBERON:0003834;2.32e-08;5!UBERON:0001533;2.32e-08;5!UBERON:0004638;6.70e-08;18!UBERON:0001986;6.70e-08;18!UBERON:0004852;6.70e-08;18!UBERON:0000072;8.12e-07;37!UBERON:0010523;9.41e-07;3!UBERON:0001915;9.41e-07;3!UBERON:0002242;9.41e-07;3!UBERON:0001982;9.41e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.96e-23,9;UBERON:0001557,2.20e-10,19;UBERON:0006914,1.67e-09,25;UBERON:0005800,2.86e-09,2;UBERON:0001515,2.86e-09,2;UBERON:0000487,1.71e-08,22;UBERON:0003834,3.05e-08,5;UBERON:0001533,3.05e-08,5;UBERON:0004638,5.49e-08,18;UBERON:0001986,5.49e-08,18;UBERON:0004852,5.49e-08,18;UBERON:0008947,1.22e-07,38;UBERON:0003258,1.22e-07,38;UBERON:0010523,6.15e-07,3;UBERON:0001915,6.15e-07,3;UBERON:0001982,6.15e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.495065411840187,0.331397375727916,0,1.20538905604795,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,1.15877215168659,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,1.37559020970034,0.208994966536811,0.516833518338658,0.71153252537342,0.33472061276467,0.402829317109147,2.28081631715554,1.95249646038536,1.10298924103761,1.62028389576352,0.803697554556718,0.44905874525234,0.225222960966644,1.53316637465883,0,0.549605231791222,0,0,0,0.496971951695318,0.25326102332916,0,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,1.0776853765575,0.653847612453835,0,0,0,0.624320153660641,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0.247266929278557,0.910161361938026,0,0.505008341862199,0.375355559615893,0,0,0,0.150238058906597,0.794025282120147,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.77460200059766,2.36018566109342,1.20505514941741,3.52940712743661,1.74303555273925,0.71181185733329,1.34831308160164,2.5508790466295,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0,0,0.502644862058154,0,0,0,0,0,0,1.01056513432752,1.85194205030644,0.951270761172991,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.358234090811393,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0.600686115687835,0,0,0,0.22001485746285,0,0,0.845302752556,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,2.39935178836937,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.613457458595699,2.50085260529839,1.08506009479894,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.362578348774867,1.40354529212299,0.184161977871793,0,0.364182336013434,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,1.36074964221213,0.647747748306418,1.54227252690289,0.270946437543853,0,0.509752546090077,0,0.895499018888713,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0,0.770243085573222,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0.869932992075073,0.37064843820784,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0,0,0.731140468893853,3.16950440270266,0.272999822815972,0.282810863907425,0,0,1.32687795048244,1.31535265576129,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.196498082026242,0,0,1.26664581178598,0,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0.539210106883961,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,1.01701460117107,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0.21787692703798,0,0.230850775511391,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,2.74297483886435,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0.661983911750998,0,0,0,0.416024019039416,0.173559738335131,0.391969589657511,0.174118413160805,0.17472666824203,1.54787429224455,3.09620260125072,0.877071805034227,1.56019368401098,0.290967049465258,0,0.225980740780532,0.274083849293502,0.397429223405979,0,0.195551382734803,0.240476460754601,0,0,0.288180834308212,0,0,1.00838358591705,0.248505071130865,0,0.135904206073614,0,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0.837847203816763,0,0,0,0.429226048136571,0,0,0,0,0.630265458457789,0.494495150286999,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.157363764404994,0.105600336519406,1.97216073266129,0,0,0.662091970365432,0,1.62899880526114,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0,0.342173675768659,0,0.747511887973863,0,0.828478110694391,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,3.76425311517075,0,0,0,0,0,0.568209015825267,1.0062716070103,0,0.228840068396924,0.302461847526478,0.310874401165561,0.591420599958536,0.796483835818512,0,0,0,0.797525143673985,0,0.751288044986092,1.14241563650639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| |||
|short_description=p3@AK023364 | |||
}} |
Revision as of 21:55, 21 January 2014
Short description: | p3@AK023364 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK023364_5end |
Coexpression cluster: | NA |
Association with transcript: | -326bp_to_AK023364_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 5.61e-11 | 45 |
endothelial cell of vascular tree | 4.54e-10 | 24 |
endothelial cell | 7.59e-10 | 36 |
lining cell | 1.55e-09 | 58 |
barrier cell | 1.55e-09 | 58 |
thoracic aorta endothelial cell | 2.86e-09 | 2 |
epithelial cell | 4.35e-09 | 253 |
smooth muscle cell of the subclavian artery | 3.05e-08 | 5 |
blood vessel endothelial cell | 5.49e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.49e-08 | 18 |
capillary endothelial cell | 6.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.96e-23 | 9 |
upper respiratory tract | 2.20e-10 | 19 |
squamous epithelium | 1.67e-09 | 25 |
segment of aorta | 2.86e-09 | 2 |
thoracic aorta | 2.86e-09 | 2 |
simple squamous epithelium | 1.71e-08 | 22 |
thoracic segment blood vessel | 3.05e-08 | 5 |
subclavian artery | 3.05e-08 | 5 |
blood vessel endothelium | 5.49e-08 | 18 |
endothelium | 5.49e-08 | 18 |
cardiovascular system endothelium | 5.49e-08 | 18 |
respiratory primordium | 1.22e-07 | 38 |
endoderm of foregut | 1.22e-07 | 38 |
microcirculatory vessel | 6.15e-07 | 3 |
endothelium of capillary | 6.15e-07 | 3 |
capillary | 6.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.94e-08 | 106 |