FFCP PHASE1:Hg19::chr3:170626681..170626687,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4305 | |||
|description=CAGE_peak_at_chr3:170626681..170626687,+ | |||
|id=chr3:170626681..170626687,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.05e-14!19;CL:0002097!4.40e-13!2;CL:0000076!1.06e-09!62;CL:0000174!5.19e-09!3;CL:0000066!9.89e-08!254;CL:0002379!3.21e-07!1;CL:0002563!4.90e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002097;5.04e-34;2!CL:0002535;5.04e-34;2!CL:0000174;3.27e-23;3!CL:0000150;1.12e-08;9!CL:0000163;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.61e-34,2;CL:0002097,7.05e-34,2;CL:0000174,4.09e-23,3;CL:0000150,1.21e-08,9;CL:0000163,1.21e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.27e-09!106;DOID:170!1.41e-09!6;DOID:162!1.27e-08!235;DOID:0050687!1.74e-08!143;DOID:14566!2.40e-08!239;DOID:1799!2.84e-07!1;DOID:10165!2.84e-07!1;DOID:1798!2.84e-07!1;DOID:3620!3.21e-07!1;DOID:3565!3.21e-07!1;DOID:1749!4.17e-07!14;DOID:6193!4.89e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4929;5.04e-34;2!DOID:4362;1.60e-14;5!DOID:170;2.45e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,5.04e-34,2;DOID:4362,1.40e-14,5;DOID:170,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0000060!4.00e-12!12;UBERON:0002369!5.19e-09!3;UBERON:0001235!5.19e-09!3;UBERON:0006858!5.19e-09!3;UBERON:0002294!2.45e-08!7;UBERON:0001173!2.45e-08!7;UBERON:0004912!2.45e-08!7;UBERON:0004913!1.06e-07!1;UBERON:0003703!1.06e-07!1;UBERON:0001174!1.06e-07!1;UBERON:0004914!1.06e-07!1;UBERON:0001242!4.90e-07!4;UBERON:0001262!4.90e-07!4;UBERON:0004786!4.90e-07!4;UBERON:0004808!4.90e-07!4;UBERON:0001277!4.90e-07!4;UBERON:0001282!6.20e-07!1;UBERON:0009842!6.20e-07!1;UBERON:0003704!6.20e-07!1;UBERON:0001171!6.20e-07!1;UBERON:0001172!6.20e-07!1;UBERON:0002394!6.79e-07!4;UBERON:0003928!6.79e-07!4;UBERON:0002022!7.40e-07!1;UBERON:0005911!9.70e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.39e-66;1!UBERON:0003703;2.39e-66;1!UBERON:0001174;2.39e-66;1!UBERON:0004914;2.39e-66;1!UBERON:0006955;5.04e-34;2!UBERON:0004801;5.04e-34;2!UBERON:0002369;3.27e-23;3!UBERON:0001235;3.27e-23;3!UBERON:0006858;3.27e-23;3!UBERON:0002114;3.27e-23;2!UBERON:0002394;8.69e-18;4!UBERON:0003928;8.69e-18;4!UBERON:0002108;1.60e-14;4!UBERON:0000002;2.45e-12;6!UBERON:0001560;2.45e-12;6!UBERON:0002294;8.99e-11;7!UBERON:0001173;8.99e-11;7!UBERON:0000058;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.39e-66,1;UBERON:0003703,2.39e-66,1;UBERON:0001174,2.39e-66,1;UBERON:0004914,2.39e-66,1;UBERON:0006955,3.61e-34,2;UBERON:0004801,3.61e-34,2;UBERON:0002114,3.27e-23,2;UBERON:0002369,4.09e-23,3;UBERON:0001235,4.09e-23,3;UBERON:0006858,4.09e-23,3;UBERON:0002108,1.60e-14,4;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0002394,2.45e-12,6;UBERON:0003928,2.45e-12,6;UBERON:0002294,1.12e-08,9;UBERON:0001173,1.12e-08,9;UBERON:0004912,1.12e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91530254476886,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0.621262677827163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.28664954824955,0.521988583930423,0,0,0,0.537266523244462,0,0.438568099157414,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,1.33070477595341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:170626681..170626687,+ | |||
}} |
Revision as of 22:35, 21 January 2014
Short description: | p@chr3:170626681..170626687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170626681..170626687, + |
Coexpression cluster: | C4305_epidermoid_papillotubular_mesothelioma_malignant_bronchioalveolar_myxofibrosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.61e-34 | 2 |
cortical cell of adrenal gland | 7.05e-34 | 2 |
steroid hormone secreting cell | 4.09e-23 | 3 |
glandular epithelial cell | 1.21e-08 | 9 |
endocrine cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.39e-66 | 1 |
extrahepatic bile duct | 2.39e-66 | 1 |
common bile duct | 2.39e-66 | 1 |
duodenal papilla | 2.39e-66 | 1 |
uterine epithelium | 3.61e-34 | 2 |
cervix epithelium | 3.61e-34 | 2 |
duodenum | 3.27e-23 | 2 |
adrenal gland | 4.09e-23 | 3 |
adrenal cortex | 4.09e-23 | 3 |
adrenal/interrenal gland | 4.09e-23 | 3 |
small intestine | 1.60e-14 | 4 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
bile duct | 2.45e-12 | 6 |
digestive system duct | 2.45e-12 | 6 |
biliary system | 1.12e-08 | 9 |
biliary tree | 1.12e-08 | 9 |
biliary bud | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.04e-34 | 2 |
cervical cancer | 1.40e-14 | 5 |
endocrine gland cancer | 2.74e-12 | 6 |