FFCP PHASE1:Hg19::chr4:2758015..2758133,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19118 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NFZ5,D6RGJ2 | |||
|association_with_transcript=0bp_to_ENST00000315423,ENST00000503235,ENST00000510267,NM_024309,uc003gfg.2,uc003gfh.2_5end | |||
|description=CAGE_peak_1_at_TNIP2_5end | |||
|id=chr4:2758015..2758133,- | |||
|ontology_enrichment_celltype=CL:0002078!9.16e-13!44;CL:0002371!2.85e-12!591;CL:0000115!4.51e-12!35;CL:0000144!5.51e-11!625;CL:0002139!8.52e-10!24;CL:0000738!3.19e-09!140;CL:0000222!3.20e-09!119;CL:0002087!4.54e-09!119;CL:0002057!4.62e-09!42;CL:0000213!1.98e-08!57;CL:0000215!1.98e-08!57;CL:0000071!2.73e-08!18;CL:0002546!2.73e-08!18;CL:0002031!1.04e-07!124;CL:0000860!1.30e-07!45;CL:0000548!7.48e-07!679;CL:0000004!7.48e-07!679;CL:0000255!7.48e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.08e-10;36!CL:0002139;6.83e-10;24!CL:0002078;5.26e-09;45!CL:0000071;2.46e-08;18!CL:0000860;3.78e-08;33!CL:0002057;3.78e-08;33!CL:0000473;4.20e-07;39!CL:0000234;4.20e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,3.28e-13,45;CL:0000115,1.58e-12,36;CL:0000738,4.60e-10,136;CL:0002087,5.44e-10,115;CL:0002139,8.52e-10,24;CL:0000473,1.79e-09,48;CL:0000234,1.79e-09,48;CL:0000222,2.02e-09,121;CL:0000860,4.62e-09,42;CL:0002057,4.62e-09,42;CL:0000213,8.50e-09,58;CL:0000215,8.50e-09,58;CL:0002031,1.66e-08,120;CL:0000071,2.73e-08,18;CL:0002546,2.73e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;2.46e-08;18!CL:0002057;4.29e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.60e-14!216;UBERON:0000055!5.47e-11!69;UBERON:0003914!6.11e-11!118;UBERON:0001009!7.61e-10!113;UBERON:0002049!3.79e-09!79;UBERON:0007798!3.79e-09!79;UBERON:0001981!6.53e-09!60;UBERON:0007500!6.53e-09!60;UBERON:0004537!6.53e-09!60;UBERON:0006965!6.53e-09!60;UBERON:0004535!7.61e-09!110;UBERON:0001986!2.73e-08!18;UBERON:0004638!2.73e-08!18;UBERON:0004852!2.73e-08!18;UBERON:0004872!3.02e-08!84;UBERON:0000487!1.02e-07!22;UBERON:0006914!1.16e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.46e-08;18!UBERON:0001986;2.46e-08;18!UBERON:0004852;2.46e-08;18!UBERON:0000487;1.27e-07;22!UBERON:0006914;1.32e-07;25!UBERON:0000353;4.41e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,9.00e-14,203;UBERON:0000055,4.12e-11,68;UBERON:0003914,4.54e-11,117;UBERON:0001009,6.61e-10,112;UBERON:0002049,3.12e-09,78;UBERON:0007798,3.12e-09,78;UBERON:0007500,5.05e-09,59;UBERON:0001981,5.05e-09,59;UBERON:0004537,5.05e-09,59;UBERON:0006965,5.05e-09,59;UBERON:0004535,6.70e-09,109;UBERON:0004872,2.57e-08,83;UBERON:0004638,2.73e-08,18;UBERON:0001986,2.73e-08,18;UBERON:0004852,2.73e-08,18;UBERON:0000926,6.07e-08,315;UBERON:0004120,6.07e-08,315;UBERON:0006603,6.07e-08,315;UBERON:0000487,1.02e-07,22;UBERON:0006914,1.16e-07,25;UBERON:0002193,3.82e-07,108;UBERON:0000353,5.80e-07,15 | |||
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| |||
|short_description=p1@TNIP2 | |||
}} |
Revision as of 23:54, 21 January 2014
Short description: | p1@TNIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000315423, ENST00000503235, ENST00000510267, NM_024309, uc003gfg.2, uc003gfh.2_5end |
EntrezGene: | TNIP2 |
HGNC: | 19118 |
UniProt: | Q8NFZ5D6RGJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 3.28e-13 | 45 |
endothelial cell | 1.58e-12 | 36 |
leukocyte | 4.60e-10 | 136 |
nongranular leukocyte | 5.44e-10 | 115 |
endothelial cell of vascular tree | 8.52e-10 | 24 |
defensive cell | 1.79e-09 | 48 |
phagocyte | 1.79e-09 | 48 |
mesodermal cell | 2.02e-09 | 121 |
classical monocyte | 4.62e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.62e-09 | 42 |
lining cell | 8.50e-09 | 58 |
barrier cell | 8.50e-09 | 58 |
hematopoietic lineage restricted progenitor cell | 1.66e-08 | 120 |
blood vessel endothelial cell | 2.73e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.73e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 9.00e-14 | 203 |
vessel | 4.12e-11 | 68 |
epithelial tube | 4.54e-11 | 117 |
circulatory system | 6.61e-10 | 112 |
vasculature | 3.12e-09 | 78 |
vascular system | 3.12e-09 | 78 |
epithelial tube open at both ends | 5.05e-09 | 59 |
blood vessel | 5.05e-09 | 59 |
blood vasculature | 5.05e-09 | 59 |
vascular cord | 5.05e-09 | 59 |
cardiovascular system | 6.70e-09 | 109 |
splanchnic layer of lateral plate mesoderm | 2.57e-08 | 83 |
blood vessel endothelium | 2.73e-08 | 18 |
endothelium | 2.73e-08 | 18 |
cardiovascular system endothelium | 2.73e-08 | 18 |
mesoderm | 6.07e-08 | 315 |
mesoderm-derived structure | 6.07e-08 | 315 |
presumptive mesoderm | 6.07e-08 | 315 |
simple squamous epithelium | 1.02e-07 | 22 |
squamous epithelium | 1.16e-07 | 25 |
hemolymphoid system | 3.82e-07 | 108 |
parenchyma | 5.80e-07 | 15 |