FFCP PHASE1:Hg19::chr4:26030535..26030540,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr4:26030535..26030540,+ | |||
|id=chr4:26030535..26030540,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.83e-10!5;CL:0000133!4.21e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.41e-48;5!CL:0002321;8.28e-23;15!CL:0000540;3.21e-15;6!CL:0000404;3.21e-15;6!CL:0000148;2.46e-09;10!CL:0000147;8.44e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.35e-48,5;CL:0000540,3.29e-15,6;CL:0000031,3.29e-15,6;CL:0000404,3.29e-15,6;CL:0000047,1.51e-11,8;CL:0000148,2.50e-09,10;CL:0000541,2.50e-09,10;CL:0000133,4.91e-07,59;CL:0000147,8.52e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000031;3.21e-15;6!UBERON:0009117;4.32e-09;10!UBERON:0005564;4.32e-09;10 | |||
|ontology_enrichment_disease=DOID:3095!8.73e-09!22;DOID:2994!8.73e-09!22;DOID:162!3.37e-08!235;DOID:14566!9.95e-08!239;DOID:0050687!2.44e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.45e-10;22!DOID:2994;1.45e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.59e-10,22;DOID:2994,1.59e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.15e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5893459849384,14.1806852103989,14.1756610300812,11.4027160516907,15.3915719034133,17.5189132356398,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0.514414748524284,1.41849132023278,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0.902399225814824,0.231046011313244,2.35304930753057,0,0,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0.379473173765715,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,2.7774258493143,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0.344743373241465,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.325942115766024,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,1.70778359451767,0.317873157960757,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.432271251462318,0,0.171594997861965,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.202210631562555,0,0.0846733320657845,0.795229689809303,0,13.0210050256666,14.0290225329178,15.786732845109,0.449947783103001,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0.463044948647668,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0.59996218756479,0,0,0,0,0,0,0.639471856518258,1.40172254815686,0,0.655257829152084,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0.354581522651905,0.111231401892069,0,0,0,0,0,0,0,0.316027223465453,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,1.38783067318587,1.09265571963696,0.253397002022874,5.609385635809,6.94765253690457,0.643264296743914,0.50141507858475,0.530450887527676,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr4:26030535..26030540,+ | |||
}} |
Revision as of 00:33, 22 January 2014
Short description: | p@chr4:26030535..26030540, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:26030535..26030540, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.35e-48 | 5 |
neuron | 3.29e-15 | 6 |
neuroblast | 3.29e-15 | 6 |
electrically signaling cell | 3.29e-15 | 6 |
neuronal stem cell | 1.51e-11 | 8 |
melanocyte | 2.50e-09 | 10 |
melanoblast | 2.50e-09 | 10 |
neurectodermal cell | 4.91e-07 | 59 |
pigment cell | 8.52e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.59e-10 | 22 |
germ cell cancer | 1.59e-10 | 22 |