FFCP PHASE1:Hg19::chr4:28437167..28437209,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=96bp_to_ENST00000509416_5end | |||
|description=CAGE_peak_1_at_ENST00000509416_5end | |||
|id=chr4:28437167..28437209,+ | |||
|ontology_enrichment_celltype=CL:0002368!2.15e-10!13;CL:0002076!6.05e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.52e-10;3!CL:0000349;3.01e-08;19!CL:0000511;1.74e-07;1!CL:0002625;1.74e-07;1!CL:0002568;1.74e-07;1!CL:0000216;1.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.14e-10,3;CL:0000349,2.94e-08,19;CL:0000511,1.07e-07,1;CL:0002625,1.07e-07,1;CL:0000216,1.07e-07,1;CL:0002568,2.04e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.00e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;8.00e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,8.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.20e-13!20;UBERON:0002619!7.74e-12!22;UBERON:0000956!1.95e-11!25;UBERON:0000203!1.95e-11!25;UBERON:0001869!2.02e-10!32;UBERON:0001893!1.54e-09!34;UBERON:0002020!2.18e-09!34;UBERON:0003528!2.18e-09!34;UBERON:0000200!2.71e-09!6;UBERON:0002791!9.70e-09!33;UBERON:0000475!2.76e-08!365;UBERON:0002780!4.55e-08!41;UBERON:0001890!4.55e-08!41;UBERON:0006240!4.55e-08!41;UBERON:0003080!9.15e-08!42;UBERON:0001049!2.44e-07!57;UBERON:0005068!2.44e-07!57;UBERON:0006241!2.44e-07!57;UBERON:0007135!2.44e-07!57;UBERON:0005631!2.48e-07!14;UBERON:0000158!2.48e-07!14;UBERON:0000478!6.25e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.52e-10;3!UBERON:0000920;9.52e-10;3!UBERON:0000478;4.20e-09;24!UBERON:0002426;5.04e-08;1!UBERON:0003831;5.04e-08;1!UBERON:0003898;5.04e-08;1!UBERON:0004830;5.04e-08;1!UBERON:0003830;5.04e-08;1!UBERON:0005175;5.04e-08;1!UBERON:0001774;5.04e-08;1!UBERON:0001103;5.04e-08;1!UBERON:0005795;1.74e-07;1!UBERON:0007029;1.74e-07;1!UBERON:0001136;1.74e-07;1!UBERON:0001343;1.74e-07;1!UBERON:0004910;1.74e-07;1!UBERON:0004813;1.74e-07;1!UBERON:0001950;3.78e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.14e-10,3;UBERON:0000478,4.09e-09,24;UBERON:0002426,4.89e-08,1;UBERON:0003831,4.89e-08,1;UBERON:0003898,4.89e-08,1;UBERON:0004830,4.89e-08,1;UBERON:0003830,4.89e-08,1;UBERON:0005175,4.89e-08,1;UBERON:0001774,4.89e-08,1;UBERON:0001103,4.89e-08,1;UBERON:0010084,4.89e-08,1;UBERON:0007029,9.44e-08,1;UBERON:0001136,1.07e-07,1;UBERON:0001343,1.07e-07,1;UBERON:0004910,1.07e-07,1;UBERON:0005154,1.07e-07,1;UBERON:0005295,1.07e-07,1;UBERON:0004813,1.07e-07,1;UBERON:0005297,1.07e-07,1;UBERON:0005294,1.07e-07,1;UBERON:0010141,1.07e-07,1;UBERON:0005891,1.07e-07,1;UBERON:0001950,3.65e-07,20 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0.412210116953756,0.772921620136887,1.30281799432113,0.506328996723799,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.386521706326594,0,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0,0.219500570817251,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.850650583454319,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,3.7983512377401,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,2.97729369382532,0.460385919864187,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,1.0877350463246,0.200506470303285,0.368323955743585,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0.275673144969061,0.966782203814463,0.870100163485371,0.170453254832202,0.178064071293475,0.826424576804891,0.768760269460425,19.2695195866822,0.30347334256665,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.719489830333259,0.274537029736055,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0.48111056362756,0.670302275535787,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.921482106297696,0,0,0,0,0,0,0.552567831062295,0,12.8858539952715,0.123084805461069,0,0.449341755736634,0,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82801391678303,0.274792780205587,3.73124343213044,0,0,0,0,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,0.176915129006678,4.27721101453538,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0,0.261177619741208,0.34945333648406,0,0,0,0,0,0,0.90392296312213,0,0,1.2029051231617,1.56441106187842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.732157589411779,0.876336514945499,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.701139929541673,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0.521745061811734,0.150257608997218,0.761610424337591,0.406870733204662,0.363697318405119,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.798169295285756,1.23069818544453,0,0.414943514785307,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0,0.977734268540344,0,0,0,0,0,0.405225507710368,1.56215619722769,0.826747186004736,0.253663240775627,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0.263091094251396,0,0.111231401892069,0.156986185701028,0,0,0,0.647782773655864,0,1.1436247068265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,1.94284397223656,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.8453114551668,0.339854229375634,0,0.257831551894309,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0.865253124247578,0,0,0,0.203977659483963,0,0,0,0.151557396436479,0,0,0,0,1.42838658878244,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,1.33064142618405,0,0,0,0,2.34640942403454,0.244482888365733,1.62758471326295,0,0,0 | |||
|short_description=p1@ENST00000509416 | |||
}} |
Revision as of 00:36, 22 January 2014
Short description: | p1@ENST00000509416 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000509416_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_ENST00000509416_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.14e-10 | 3 |
extraembryonic cell | 2.94e-08 | 19 |
androgen binding protein secreting cell | 1.07e-07 | 1 |
seminiferous tubule epithelial cell | 1.07e-07 | 1 |
Sertoli cell | 1.07e-07 | 1 |
mesenchymal stem cell of Wharton's jelly | 2.04e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.14e-10 | 3 |
extraembryonic structure | 4.09e-09 | 24 |
chest muscle | 4.89e-08 | 1 |
respiratory system muscle | 4.89e-08 | 1 |
skeletal muscle of trunk | 4.89e-08 | 1 |
respiratory system skeletal muscle | 4.89e-08 | 1 |
thoracic segment muscle | 4.89e-08 | 1 |
chest organ | 4.89e-08 | 1 |
muscle of trunk | 4.89e-08 | 1 |
diaphragm | 4.89e-08 | 1 |
future diaphragm | 4.89e-08 | 1 |
surface | 9.44e-08 | 1 |
mesothelium | 1.07e-07 | 1 |
seminiferous tubule of testis | 1.07e-07 | 1 |
epithelium of male gonad | 1.07e-07 | 1 |
epithelial cord | 1.07e-07 | 1 |
sex cord | 1.07e-07 | 1 |
seminiferous tubule epithelium | 1.07e-07 | 1 |
testis sex cord | 1.07e-07 | 1 |
genital ridge | 1.07e-07 | 1 |
primitive sex cord of indifferent gonad | 1.07e-07 | 1 |
coelomic epithelium | 1.07e-07 | 1 |
neocortex | 3.65e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.84e-08 | 1 |