FFCP PHASE1:Hg19::chr4:119952273..119952296,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C669 | |||
|description=CAGE_peak_at_chr4:119952273..119952296,+ | |||
|id=chr4:119952273..119952296,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;3.10e-10;3!CL:0000136;2.76e-08;13!CL:0002617;2.88e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,2.49e-10,3;CL:0002617,2.89e-07,2;CL:0000136,3.97e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.21e-09;65!UBERON:0007297;4.47e-08;2!UBERON:0006965;2.88e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.31e-09;3!DOID:127;1.31e-09;3!DOID:0060072;2.58e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.94e-10,3;DOID:127,9.94e-10,3;DOID:0060072,2.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.53e-24!115;UBERON:0000468!2.98e-09!659;UBERON:0003688!7.20e-08!6;UBERON:0002358!7.20e-08!6;UBERON:0003684!7.20e-08!6;UBERON:0001178!7.20e-08!6;UBERON:0000062!9.56e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.18e-13;6!UBERON:0002358;2.18e-13;6!UBERON:0003684;2.18e-13;6!UBERON:0001178;2.18e-13;6!UBERON:0006947;3.30e-11;3!UBERON:0004054;3.30e-11;3!UBERON:0004457;8.26e-09;9!UBERON:0000042;8.26e-09;9!UBERON:0005904;1.71e-08;4!UBERON:0004175;2.06e-08;21!UBERON:0005090;3.46e-08;2!UBERON:0001630;3.46e-08;2!UBERON:0003135;1.46e-07;11!UBERON:0000341;1.96e-07;2!UBERON:0001443;5.67e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.25e-13,6;UBERON:0002358,2.25e-13,6;UBERON:0003684,2.25e-13,6;UBERON:0001178,2.25e-13,6;UBERON:0007023,8.37e-13,114;UBERON:0006947,2.94e-11,3;UBERON:0004054,2.94e-11,3;UBERON:0005904,1.57e-08,4;UBERON:0005090,3.36e-08,2;UBERON:0001630,3.36e-08,2;UBERON:0000341,1.46e-07,2;UBERON:0003135,1.51e-07,11;UBERON:0004175,5.61e-07,25;UBERON:0001443,6.50e-07,11 | |||
|phase1_expression=1.2717486548939,2.99740733447376,1.83240725324762,2.00146596706261,2.68176656656373,2.61701557230111,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.689491361473237,3.22742341791913,1.35426486594342,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.870627715885752,2.26954089876456,1.24564449799115,0.251248665256743,0,0,0.605399502633369,2.20966581592539,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7308685049499,0,0,0,0.125118519871964,0,0.877955241761676,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0.423863802319124,0,0.309157587715317,1.28820270022815,0.18611685633159,0,0.0974370051611986,0.757301322732344,0.460249493211497,0,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,1.32969058292435,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,2.07970861530807,1.78428988797162,0.630809660135739,0.819989904948992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48864684691266,1.07423381301644,0.841980283299221,0.512556597022804,2.04682899626681,2.57366273829772,0,0,0.532685175939381,0,0,0.232420756919918,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.330037999682352,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.356128142586949,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0.552567831062295,0,0,0,1.24415835064723,0,0,0,6.80639498894842,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0,0,0.110579259931225,0,0.438770794307945,0,0.139423744278603,1.61595542857974,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.32686346755009,3.05515072466813,0,0.123563938946503,0,0.067401132980677,4.81546588379273,0,0,0,0,3.55125962564451,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,4.26751672549045,0,0.677942222341597,0,0,0.126621591911757,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,3.20824593616357,0,0.798716001995964,2.57535628881943,0.446342914883745,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,1.42939065274673,2.64836788146173,0,1.62899880526114,1.72844298240254,1.30634944043764,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.640724475406168,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0.606596470166591,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0,0.302461847526478,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0.406870733204662,0.363697318405119,0,0,2.78667122089031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.327130788511688,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.655257829152084,0,0,0,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,12.4052794597324,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,2.43328587836593,0,0,2.73947616152849,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,7.62096690343672,0,0,0,0,0,0,11.6537190693821,7.90503612793102,4.6392577253528,1.45713297917742,0,0,0,0,0,0,0.771741581079447,1.5299169235277,0,15.9346409140039,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0,0.432626562123789,0,0,0,0,0,0,0,1.28823786971007,0.535928260312357,0,0,3.62497769231668,1.66645102024618,0.0645889098360061,0.124149428591716,0.112131862580613,0.12729431655633,0.202117188958219,1.52401723527873,5.13349951627922,0.0673520530145875,0.430333232356058,0,0,0,1.9307228228694,0,9.38563769613817,1.95586310692586,0.406896178315738,0.665756774185513,1.00636896795513,0 | |||
|short_description=p@chr4:119952273..119952296,+ | |||
}} |
Revision as of 02:54, 22 January 2014
Short description: | p@chr4:119952273..119952296, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr4:119952273..119952296, + |
Coexpression cluster: | C669_skeletal_smooth_bladder_esophagus_prostate_penis_ductus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.49e-10 | 3 |
adipocyte of breast | 2.89e-07 | 2 |
fat cell | 3.97e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.25e-13 | 6 |
peritoneum | 2.25e-13 | 6 |
abdominal cavity | 2.25e-13 | 6 |
visceral peritoneum | 2.25e-13 | 6 |
adult organism | 8.37e-13 | 114 |
male genital duct | 2.94e-11 | 3 |
internal male genitalia | 2.94e-11 | 3 |
duct of male reproductive system | 1.57e-08 | 4 |
muscle structure | 3.36e-08 | 2 |
muscle organ | 3.36e-08 | 2 |
throat | 1.46e-07 | 2 |
male reproductive organ | 1.51e-07 | 11 |
internal genitalia | 5.61e-07 | 25 |
chest | 6.50e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.94e-10 | 3 |
leiomyoma | 9.94e-10 | 3 |
benign neoplasm | 2.11e-07 | 4 |