FFCP PHASE1:Hg19::chr4:155486954..155486985,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=2244 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3662 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENST00000473984_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_FGB_5end | |||
|id=chr4:155486954..155486985,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.27e-31!12;CL:0000417!2.27e-31!12;CL:0000668!2.27e-31!12;CL:0000414!2.27e-31!12;CL:0000412!2.27e-31!12;CL:0000182!2.27e-31!12;CL:0000223!1.42e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.20e-17;12!CL:0002231;1.46e-08;3!CL:0002563;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.20e-17,12;CL:0000223,1.08e-09,58;CL:0002231,1.51e-08,3;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.00e-09;11!CL:0000223;7.81e-09;58!UBERON:0009497;8.89e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.64e-35!19;UBERON:0006925!7.64e-35!19;UBERON:0008836!7.64e-35!19;UBERON:0005057!9.88e-32!26;UBERON:0008835!5.51e-30!22;UBERON:0003894!5.51e-30!22;UBERON:0009854!1.20e-28!23;UBERON:0007499!2.73e-26!25;UBERON:0009497!2.73e-26!25;UBERON:0000015!2.73e-26!25;UBERON:0002423!2.73e-26!25;UBERON:0006235!2.73e-26!25;UBERON:0004161!2.73e-26!25;UBERON:0005172!9.75e-26!55;UBERON:0005173!9.75e-26!55;UBERON:0009856!3.01e-25!26;UBERON:0002417!4.84e-23!61;UBERON:0000916!4.84e-23!61;UBERON:0002365!4.85e-21!31;UBERON:0002330!4.85e-21!31;UBERON:0002368!1.55e-18!35;UBERON:0003929!2.74e-18!54;UBERON:0000949!3.21e-14!45;UBERON:0002530!1.95e-13!59;UBERON:0005177!2.17e-12!107;UBERON:0009569!1.23e-11!113;UBERON:0001301!1.32e-11!1;UBERON:0005911!1.41e-11!82;UBERON:0004921!6.34e-10!129;UBERON:0004185!6.34e-10!129;UBERON:0001007!5.75e-08!155;UBERON:0001555!5.75e-08!155;UBERON:0007026!5.75e-08!155;UBERON:0001041!1.40e-07!98;UBERON:0004119!3.69e-07!169;UBERON:0000925!3.69e-07!169;UBERON:0006595!3.69e-07!169;UBERON:0000466!5.59e-07!126;UBERON:0000077!9.63e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.54e-29;19!UBERON:0006925;2.54e-29;19!UBERON:0002423;2.28e-22;25!UBERON:0002365;4.74e-18;31!UBERON:0002330;4.74e-18;31!UBERON:0002368;1.26e-15;33!UBERON:0000949;2.25e-11;43!UBERON:0002530;7.28e-09;57!UBERON:0005172;3.00e-08;52!UBERON:0005173;3.00e-08;52!UBERON:0001007;4.20e-08;81!UBERON:0001242;9.90e-07;4!UBERON:0001262;9.90e-07;4!UBERON:0004786;9.90e-07;4!UBERON:0004808;9.90e-07;4!UBERON:0001277;9.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.54e-29,19;UBERON:0006925,2.54e-29,19;UBERON:0008836,2.54e-29,19;UBERON:0008835,2.26e-25,22;UBERON:0003894,2.26e-25,22;UBERON:0009854,2.76e-24,23;UBERON:0007499,2.28e-22,25;UBERON:0009497,2.28e-22,25;UBERON:0000015,2.28e-22,25;UBERON:0002423,2.28e-22,25;UBERON:0006235,2.28e-22,25;UBERON:0004161,2.28e-22,25;UBERON:0009856,1.61e-21,26;UBERON:0003929,6.87e-20,54;UBERON:0002365,4.26e-18,31;UBERON:0002330,4.26e-18,31;UBERON:0002368,4.66e-16,35;UBERON:0002530,1.62e-13,59;UBERON:0005911,4.47e-13,82;UBERON:0000949,1.54e-12,45;UBERON:0005172,1.77e-10,54;UBERON:0005173,1.77e-10,54;UBERON:0002417,1.92e-09,60;UBERON:0000916,1.92e-09,60;UBERON:0004921,5.84e-09,118;UBERON:0001007,2.93e-07,145;UBERON:0001555,2.93e-07,145;UBERON:0007026,2.93e-07,145;UBERON:0000490,3.70e-07,148;UBERON:0001242,9.63e-07,4;UBERON:0001262,9.63e-07,4;UBERON:0004786,9.63e-07,4;UBERON:0004808,9.63e-07,4;UBERON:0001277,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,168.584196313035,157.25235466842,82.1197970287152,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90374778039739,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.81393546447267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.494495150286999,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,103.465876976726,25.1763088933221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@FGB | |||
}} |
Revision as of 03:34, 22 January 2014
Short description: | p4@FGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_FGB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 21bp_to_ENST00000473984_5end |
EntrezGene: | FGB |
HGNC: | 3662 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.20e-17 | 12 |
endodermal cell | 1.08e-09 | 58 |
epithelial cell of prostate | 1.51e-08 | 3 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 2.54e-29 | 19 |
digestive gland | 2.54e-29 | 19 |
liver bud | 2.54e-29 | 19 |
hepatic diverticulum | 2.26e-25 | 22 |
liver primordium | 2.26e-25 | 22 |
digestive tract diverticulum | 2.76e-24 | 23 |
epithelial sac | 2.28e-22 | 25 |
epithelium of foregut-midgut junction | 2.28e-22 | 25 |
anatomical boundary | 2.28e-22 | 25 |
hepatobiliary system | 2.28e-22 | 25 |
foregut-midgut junction | 2.28e-22 | 25 |
septum transversum | 2.28e-22 | 25 |
sac | 1.61e-21 | 26 |
gut epithelium | 6.87e-20 | 54 |
exocrine gland | 4.26e-18 | 31 |
exocrine system | 4.26e-18 | 31 |
endocrine gland | 4.66e-16 | 35 |
gland | 1.62e-13 | 59 |
endo-epithelium | 4.47e-13 | 82 |
endocrine system | 1.54e-12 | 45 |
abdomen element | 1.77e-10 | 54 |
abdominal segment element | 1.77e-10 | 54 |
abdominal segment of trunk | 1.92e-09 | 60 |
abdomen | 1.92e-09 | 60 |
subdivision of digestive tract | 5.84e-09 | 118 |
digestive system | 2.93e-07 | 145 |
digestive tract | 2.93e-07 | 145 |
primitive gut | 2.93e-07 | 145 |
unilaminar epithelium | 3.70e-07 | 148 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |