FFCP PHASE1:Hg19::chr4:160149353..160149380,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16854 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_ENST00000504604_5end | |||
|description=CAGE_peak_4_at_RAPGEF2_5end | |||
|id=chr4:160149353..160149380,+ | |||
|ontology_enrichment_celltype=CL:0000077!5.49e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.10e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.13e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.92e-13;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.43e-10!115;UBERON:0003075!6.06e-09!86;UBERON:0007284!6.06e-09!86;UBERON:0001737!6.52e-09!9;UBERON:0000119!8.54e-09!312;UBERON:0000483!1.28e-08!309;UBERON:0002346!3.63e-08!90;UBERON:0000064!6.49e-08!219;UBERON:0000481!7.09e-08!347;UBERON:0000477!3.34e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.33e-28;9!UBERON:0001557;2.33e-28;9!UBERON:0000072;2.82e-09;37!UBERON:0000065;3.37e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.47e-28,9;UBERON:0001557,4.42e-15,19;UBERON:0008947,1.19e-09,38;UBERON:0003258,1.19e-09,38;UBERON:0000072,1.51e-08,47;UBERON:0000065,2.25e-08,54 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,0,0.434539556882471,0.795285947051099,0.486634870302636,0.378139268656271,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0.24406205754817,0.735326160691737,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.397227542439656,0.860509862246441,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.70296429550139,0,0,0,0,0.323745888736263,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0.340296549480063,0.358779271377724,0.427114777637135,0,1.20036438433761,1.13357782162283,0.257640540045629,0,0,0,1.00973509697646,0.0920498986422993,0.323292113637624,0.355009592516614,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,2.12952240071719,3.20310911148393,2.16909926895134,1.32352767278873,2.61455332910887,3.32178866755535,1.48314438976181,2.15843611637881,3.07797725557112,0,0,0,0,0,0,0,0,0.491953754172454,0.343135620597051,0.109750285408626,0,0.603173834469785,0.185176890317059,0.977424915930974,0,2.88662684050547,0.115930404975077,0,0.433099343283221,0,0,0,0,0,0,0,0,0.16798212819886,0,0.895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0.190493682876507,0,0,0,0.616964956219941,0,0,0.112131084345361,0,0.66004457238855,1.03417372606222,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,1.06617584622764,0,0.301439377059586,0,0.299918973546171,0,0,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0.315404830067869,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0.561320188866147,0.384417447767103,0.511707249066704,0.160853921143607,0,0.462629081407967,0.177561725313127,0.492762936082855,0,0.116210378459959,0.604297247958111,0.601519410909855,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0.976135183992909,0.515205058238611,0,0,0,0,1.6068392984416,0,0.308097234229289,0,0.413509717453592,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0.576570202095319,2.55225424989168,0,0.464845549297286,1.25924938732256,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0.949138274156178,0.190630193923825,0.255897791311334,0,0,0,2.15846949099978,0.823611089208164,0.589062011728432,0.202182481573316,0,0,0,0,0,1.09199929126389,0.848432591722276,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,2.29458163526482,0.785992328104969,0,0.354761064070598,0.633322905892992,0,0,0.699869440489966,0.192444225451024,0,0,0.564862804660675,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,2.24568648489864,0,0.849523652246594,0,0,0.23874448473769,0,0.307160702099232,0.994147647766298,0.562677665642051,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0.306806047506464,0,0,0.718946809178615,0.179021174675609,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,1.77148277162768,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,1.63407695278485,0,0.384751292518985,0,0.23056390438806,0.179515288819544,0.325942115766024,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0.706765357169704,0,0,0,0,0,0,0,0.943615861729479,0,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.252746318513952,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,2.08942095792966,0.17472666824203,0,0.967563312890852,1.5348756588099,0.410577285266046,0.0969890164884194,0,0.225980740780532,0.137041924646751,0.397429223405979,0.316553979779393,0.782205530939212,0.160317640503067,0.213452994739353,0,0,0,0,0.432164393964449,0.49701014226173,1.17847017308398,0.271808412147228,1.04602846312333,0.611989305817931,0,0.600420288709789,0.547621515567972,0,0.859530882839914,0,0.837847203816763,1.83328339209347,1.43574604915363,0.399358000997982,0.858452096273142,0.669514372325618,6.382429886239,0.720599767084807,0,0,0,0,0,0.169346664131569,0,0.544813624446302,0.160753148465019,0,0,0,0,0.364497339948148,0,0.157611414598396,0.157363764404994,0.316801009558219,0.896436696664224,1.53532157855556,0.714695326373367,0.662091970365432,0,0,0,0,1.19730191562487,0,1.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| |||
|short_description=p4@RAPGEF2 | |||
}} |
Revision as of 03:46, 22 January 2014
Short description: | p4@RAPGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAPGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000504604_5end |
EntrezGene: | RAPGEF2 |
HGNC: | 16854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.13e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.47e-28 | 9 |
upper respiratory tract | 4.42e-15 | 19 |
respiratory primordium | 1.19e-09 | 38 |
endoderm of foregut | 1.19e-09 | 38 |
segment of respiratory tract | 1.51e-08 | 47 |
respiratory tract | 2.25e-08 | 54 |