FFCP PHASE1:Hg19::chr5:12662855..12662861,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr5:12662855..12662861,+ | |||
|id=chr5:12662855..12662861,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.69e-27!5;CL:0000039!9.02e-12!7;CL:0000586!9.02e-12!7;CL:0000540!1.20e-08!6;CL:0000031!1.20e-08!6;CL:0000404!1.20e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.61e-72;5!CL:0002321;4.50e-24;15!CL:0000540;5.03e-22;6!CL:0000404;5.03e-22;6!CL:0000148;1.09e-13;10!CL:0000147;6.05e-10;14!CL:0000710;4.07e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.96e-72,5;CL:0000540,4.68e-22,6;CL:0000031,4.68e-22,6;CL:0000404,4.68e-22,6;CL:0000047,1.02e-16,8;CL:0000148,1.09e-13,10;CL:0000541,1.09e-13,10;CL:0000147,6.05e-10,14;CL:0000133,3.13e-08,59;CL:0000710,4.07e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;5.03e-22;6 | |||
|ontology_enrichment_disease=DOID:3095!9.58e-08!22;DOID:2994!9.58e-08!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!5.83e-16!8;UBERON:0003135!1.53e-11!11;UBERON:0000991!3.31e-08!21;UBERON:0009196!3.31e-08!21;UBERON:0009117!3.31e-08!21;UBERON:0005564!3.31e-08!21;UBERON:0004176!8.34e-08!22;UBERON:0003133!5.96e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.61e-08;49!UBERON:0000473;6.62e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.86e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2234248665496,8.34937540425357,14.1756610300812,22.39078788332,19.4287055174234,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0,0,0,1.78309414843965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,3.30711522711884,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.64518890790115,8.5274450690285,8.72424709861289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,2.18531143927391,0,0.203977659483963,0,1.28652859348783,0.50141507858475,1.06090177505535,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:12662855..12662861,+ | |||
}} |
Revision as of 04:42, 22 January 2014
Short description: | p@chr5:12662855..12662861, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:12662855..12662861, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.96e-72 | 5 |
neuron | 4.68e-22 | 6 |
neuroblast | 4.68e-22 | 6 |
electrically signaling cell | 4.68e-22 | 6 |
neuronal stem cell | 1.02e-16 | 8 |
melanocyte | 1.09e-13 | 10 |
melanoblast | 1.09e-13 | 10 |
pigment cell | 6.05e-10 | 14 |
neurectodermal cell | 3.13e-08 | 59 |
neurecto-epithelial cell | 4.07e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 6.86e-08 | 8 |