FFCP PHASE1:Hg19::chr5:159849184..159849205,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9690 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000519287_5end | |||
|coexpression_cluster_id=C1601 | |||
|description=CAGE_peak_4_at_PTTG1_5end | |||
|id=chr5:159849184..159849205,+ | |||
|ontology_enrichment_celltype=CL:0000220!8.43e-11!246;CL:0000055!9.27e-11!180;CL:0002321!1.64e-10!248;CL:0002076!2.03e-08!43;CL:0002159!6.21e-08!13;CL:0002368!1.67e-07!13;CL:0000221!4.03e-07!71;CL:0002371!4.73e-07!591;CL:0002620!5.08e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002159;3.49e-23;14!CL:0002166;1.73e-17;3!CL:0002621;7.36e-17;3!CL:0002251;6.18e-12;20!CL:0001014;1.34e-11;2!CL:0001016;1.34e-11;2!CL:0000575;3.27e-11;2!CL:0002076;2.36e-09;42!CL:0000240;2.09e-08;6!CL:0000311;2.09e-08;6!CL:0000079;2.09e-08;6!CL:0000237;2.09e-08;6!CL:0002077;4.58e-08;34!CL:0000346;9.35e-08;3!CL:1000428;9.35e-08;3!CL:0002582;9.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.98e-23,14;CL:0002166,1.70e-17,3;CL:0002621,4.73e-17,3;CL:0002251,4.93e-12,20;CL:0001014,1.04e-11,2;CL:0001016,1.04e-11,2;CL:0000575,1.85e-11,2;CL:0002076,1.12e-10,42;CL:0002077,8.71e-09,34;CL:0000240,2.23e-08,6;CL:0000311,2.23e-08,6;CL:0000079,2.23e-08,6;CL:0000237,2.23e-08,6;CL:0000036,2.23e-08,6;CL:0000357,2.23e-08,6;CL:0000114,2.23e-08,6;CL:0002582,5.04e-08,3;CL:0000346,8.48e-08,3;CL:1000428,8.48e-08,3;CL:0000223,3.10e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000357;2.09e-08;6!CL:0000114;2.09e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.37e-15!95;UBERON:0002097!4.47e-11!40;UBERON:0002199!5.75e-11!45;UBERON:0002416!5.75e-11!45;UBERON:0000486!9.93e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.36e-17;3!UBERON:0001708;3.06e-13;4!UBERON:0008895;3.06e-13;4!UBERON:0011159;1.11e-10;5!UBERON:0003729;5.62e-10;13!UBERON:0010371;2.56e-09;31!UBERON:0001003;1.90e-08;15!UBERON:0007376;1.90e-08;15!UBERON:0000412;9.35e-08;3!UBERON:0001992;9.35e-08;3!UBERON:0003929;1.75e-07;7!UBERON:0000486;2.95e-07;12!UBERON:0000161;9.80e-07;19!UBERON:0000166;9.80e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.73e-17,3;UBERON:0003102,6.57e-15,99;UBERON:0001708,3.03e-13,4;UBERON:0008895,3.03e-13,4;UBERON:0011159,1.10e-10,5;UBERON:0003729,5.18e-10,13;UBERON:0000033,2.00e-09,56;UBERON:0010188,5.67e-09,6;UBERON:0002539,5.67e-09,6;UBERON:0008816,5.67e-09,6;UBERON:0001003,2.34e-08,15;UBERON:0007376,2.34e-08,15;UBERON:0007383,2.34e-08,15;UBERON:0000153,2.61e-08,62;UBERON:0007811,2.61e-08,62;UBERON:0000412,8.48e-08,3;UBERON:0001992,8.48e-08,3;UBERON:0005085,3.07e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,1.46062018077475,0.975865597581014,0.369363174230364,0,0,0,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,2.75826367343678,0.30120591877825,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,1.0843174571537,0.50133791063589,0.724232594804119,0,0,0.189069634328136,0,0,0,1.45718115317017,1.85392221392215,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.717558542755448,0,0.211931901159562,1.20036438433761,0.309157587715317,0.257640540045629,0.18611685633159,0.675105328965065,0.584622030967192,0.504867548488229,0.0920498986422993,0.323292113637624,0.710019185033229,1.5112814734146,0.508681776931463,5.41130388857231,1.63647672354501,4.30206893083506,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,3.29250856225877,1.1240175325762,0.301586917234893,1.574003567695,0.651616610620649,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,13.1227367581488,7.0552493843521,5.95455408418023,0.626909658919938,1.45316969256981,1.53353071666084,1.47798971368783,0,0,0,0,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0,0.895304816199478,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0.737476674166813,0.695068915744663,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.771048469013278,0.532685175939381,1.56041596426237,0.519254429183621,1.85936605535935,0,4.81215528727884,0.184161977871793,0.229628896329213,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,1.30012049207304,0,0.290012154876366,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0.661139661443912,0.192190067365106,0.510450849978337,0.2023155617111,0.464845549297286,0,0,0.308033580176089,1.06461206063404,0,0.37064843820784,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,1.65409603063837,0,0,0.578775534266688,0,0.202910376962704,0.92947049429925,0.845086807596724,0.717056761020258,0,0,0.354761064070598,0.844430541190656,0,0,0,0.577332676353072,0.670302275535787,1.08890984861323,0,0.43050537267123,0,0.886860307073351,1.60806380144872,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0.123084805461069,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0,0.0730893170861856,0,0.678923115418936,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0.288109595976299,0,0.471388069233591,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37460837327251,1.5476039091159,0,0.670869375198532,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.454947352624943,0.285465333544967,0,0.468334905806882,0,0.447764408660622,0,0.554805861502613,1.89403005275089,0,0.889811221596536,0.228840068396924,0.453692771289717,0.466311601748341,0.295710299979268,0.318593534327405,0,0,0.414706207840855,0,0,0,0.380805212168795,0.406870733204662,0.363697318405119,0,0,0,1.20008329398946,0.686791410365586,0.673498977531838,0,0,0,0,0.226705925512272,0.231522474323834,0.244736704506468,0.179088841081487,0,0.219284049578707,0.353378291891762,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0.736423801007363,0.139879507719444,0.622077260032973,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,1.10057159113007,0.115525666150338,0.381382095467167,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0.47404083519818,0,0,0.801711364730253,0.828864656652147,1.87790324803345,0,0,0.354996002191696,0.511280428554946,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.124149428591716,0.112131862580613,0.381882949668989,0,0.435433495793923,0.684466602170562,0.202056159043763,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p4@PTTG1 | |||
}} |
Revision as of 08:46, 22 January 2014
Short description: | p4@PTTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PTTG1_5end |
Coexpression cluster: | C1601_Mallassezderived_Gingival_Keratinocyte_Prostate_Sebocyte_salivary_cervical |
Association with transcript: | -8bp_to_ENST00000519287_5end |
EntrezGene: | PTTG1 |
HGNC: | 9690 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 3.98e-23 | 14 |
epithelial cell of Malassez | 1.70e-17 | 3 |
gingival epithelial cell | 4.73e-17 | 3 |
epithelial cell of alimentary canal | 4.93e-12 | 20 |
CD1a-positive Langerhans cell | 1.04e-11 | 2 |
immature CD1a-positive Langerhans cell | 1.04e-11 | 2 |
corneal epithelial cell | 1.85e-11 | 2 |
endo-epithelial cell | 1.12e-10 | 42 |
ecto-epithelial cell | 8.71e-09 | 34 |
stratified squamous epithelial cell | 2.23e-08 | 6 |
keratin accumulating cell | 2.23e-08 | 6 |
stratified epithelial cell | 2.23e-08 | 6 |
keratinizing barrier epithelial cell | 2.23e-08 | 6 |
epithelial fate stem cell | 2.23e-08 | 6 |
stratified epithelial stem cell | 2.23e-08 | 6 |
surface ectodermal cell | 2.23e-08 | 6 |
visceral preadipocyte | 5.04e-08 | 3 |
hair follicle dermal papilla cell | 8.48e-08 | 3 |
stem cell of epidermis | 8.48e-08 | 3 |
endodermal cell | 3.10e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.73e-17 | 3 |
surface structure | 6.57e-15 | 99 |
jaw skeleton | 3.03e-13 | 4 |
splanchnocranium | 3.03e-13 | 4 |
primary subdivision of cranial skeletal system | 1.10e-10 | 5 |
mouth mucosa | 5.18e-10 | 13 |
head | 2.00e-09 | 56 |
protuberance | 5.67e-09 | 6 |
pharyngeal arch | 5.67e-09 | 6 |
embryonic head | 5.67e-09 | 6 |
skin epidermis | 2.34e-08 | 15 |
outer epithelium | 2.34e-08 | 15 |
enveloping layer of ectoderm | 2.34e-08 | 15 |
anterior region of body | 2.61e-08 | 62 |
craniocervical region | 2.61e-08 | 62 |
dermal papilla | 8.48e-08 | 3 |
papillary layer of dermis | 8.48e-08 | 3 |
ectodermal placode | 3.07e-07 | 31 |