FFCP PHASE1:Hg19::chr5:167278055..167278068,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:167278055..167278068,+ | |||
|id=chr5:167278055..167278068,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.68e-15!75;CL:0000077!7.06e-15!19;CL:0002334!2.43e-11!12;CL:0002620!5.86e-11!23;CL:0002579!6.18e-10!3;CL:0002580!1.00e-09!3;CL:0000055!4.90e-07!180;CL:0002097!7.76e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.01e-23;19!CL:0000511;1.30e-10;1!CL:0002625;1.30e-10;1!CL:0000216;1.30e-10;1!CL:0002557;2.87e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.70e-23,19;CL:0000511,1.30e-10,1;CL:0002625,1.30e-10,1;CL:0000216,1.30e-10,1;CL:0002557,3.61e-10,1;CL:0000213,4.63e-07,58;CL:0000215,4.63e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.14e-10!14;DOID:3451!2.95e-07!2;DOID:4159!2.95e-07!2;DOID:0060122!2.95e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3571;8.14e-11;1!DOID:3151;8.94e-11;1!DOID:3149;8.94e-11;1!DOID:4235;2.87e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,8.14e-11,1;DOID:3151,8.95e-11,1;DOID:3149,8.95e-11,1;DOID:4235,2.28e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!2.82e-10!5;UBERON:0004532!2.82e-10!5;UBERON:0003688!2.01e-08!6;UBERON:0002358!2.01e-08!6;UBERON:0003684!2.01e-08!6;UBERON:0001178!2.01e-08!6;UBERON:0002097!3.86e-08!40;UBERON:0002199!5.88e-07!45;UBERON:0002416!5.88e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.30e-10;1!UBERON:0001343;1.30e-10;1!UBERON:0004910;1.30e-10;1!UBERON:0004813;1.30e-10;1!UBERON:0001282;2.87e-10;1!UBERON:0009842;2.87e-10;1!UBERON:0003704;2.87e-10;1!UBERON:0001171;2.87e-10;1!UBERON:0001172;2.87e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.30e-10,1;UBERON:0001343,1.30e-10,1;UBERON:0004910,1.30e-10,1;UBERON:0005154,1.30e-10,1;UBERON:0005295,1.30e-10,1;UBERON:0004813,1.30e-10,1;UBERON:0005297,1.30e-10,1;UBERON:0005294,1.30e-10,1;UBERON:0010141,1.30e-10,1;UBERON:0005891,1.30e-10,1;UBERON:0001282,3.01e-10,1;UBERON:0009842,3.01e-10,1;UBERON:0003704,3.01e-10,1;UBERON:0001171,3.01e-10,1;UBERON:0001172,3.01e-10,1 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,1.68203280042692,0,0.49333509683432,0,0.67355336034844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24775401476023,0.179389635688862,0,0.211931901159562,0.600182192168805,0,0.515281080091258,0.18611685633159,3.20675031258406,0.779496041289589,1.26216887122057,0.276149695926898,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.80863626235752,2.61460037580088,5.19859554146697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.744323423456331,0.767309866440312,0.280660094433074,1.79394808957981,0.511707249066704,0.482561763430822,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56629755439048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37325906438606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05861646634267,0,0.147855149989634,0,0,0,0,0.53168342911599,0,1.05180326298053,4.56966254602554,0.813741466409323,0,1.71856891267982,0.464033759878494,0.796191777397232,0,0,0,0,0.57785949122191,0.214441591374926,0.260994291965212,15.8694147858591,0,0,0,12.6608593335999,1.09642024789354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81605220784102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69927114687817,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:167278055..167278068,+ | |||
}} |
Revision as of 08:53, 22 January 2014
Short description: | p@chr5:167278055..167278068, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167278055..167278068, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.70e-23 | 19 |
androgen binding protein secreting cell | 1.30e-10 | 1 |
seminiferous tubule epithelial cell | 1.30e-10 | 1 |
Sertoli cell | 1.30e-10 | 1 |
fibroblast of pulmonary artery | 3.61e-10 | 1 |
lining cell | 4.63e-07 | 58 |
barrier cell | 4.63e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.30e-10 | 1 |
seminiferous tubule of testis | 1.30e-10 | 1 |
epithelium of male gonad | 1.30e-10 | 1 |
epithelial cord | 1.30e-10 | 1 |
sex cord | 1.30e-10 | 1 |
seminiferous tubule epithelium | 1.30e-10 | 1 |
testis sex cord | 1.30e-10 | 1 |
genital ridge | 1.30e-10 | 1 |
primitive sex cord of indifferent gonad | 1.30e-10 | 1 |
coelomic epithelium | 1.30e-10 | 1 |
intralobular bile duct | 3.01e-10 | 1 |
acinus | 3.01e-10 | 1 |
intrahepatic bile duct | 3.01e-10 | 1 |
portal lobule | 3.01e-10 | 1 |
hepatic acinus | 3.01e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.14e-11 | 1 |
skin squamous cell carcinoma | 8.95e-11 | 1 |
keratoacanthoma | 8.95e-11 | 1 |
spindle cell sarcoma | 2.28e-10 | 1 |