FFCP PHASE1:Hg19::chr5:170736216..170736238,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13532 | |||
|TSSclassifier=strong | |||
|UniProt=O43711 | |||
|association_with_transcript=-49bp_to_ENST00000296921,NM_021025,uc003mbf.2_5end | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_2_at_TLX3_5end | |||
|id=chr5:170736216..170736238,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.48e-10!254;CL:0002150!2.18e-07!3;CL:0000861!2.18e-07!3;CL:0000039!9.72e-07!7;CL:0000586!9.72e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.18e-09;2!CL:0000242;3.18e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.18e-09,2;CL:0000066,6.19e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.02e-14;29!UBERON:0006215;7.66e-13;3 | |||
|ontology_enrichment_disease=DOID:305!1.14e-17!106;DOID:0050687!6.79e-17!143;DOID:162!2.22e-12!235;DOID:14566!8.01e-12!239;DOID:5409!1.74e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:305;9.25e-09;106!DOID:4468;1.97e-08;2!DOID:154;3.08e-08;2!DOID:4236;3.08e-08;2!DOID:4362;5.32e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.14e-23,143;DOID:305,1.14e-22,106;DOID:162,8.47e-21,235;DOID:14566,3.69e-20,239;DOID:4468,2.25e-08,2;DOID:154,2.81e-08,2;DOID:4236,2.81e-08,2;DOID:4362,4.12e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.54e-19!9;UBERON:0003076!2.18e-19!15;UBERON:0003057!2.18e-19!15;UBERON:0004733!9.47e-18!12;UBERON:0002028!9.47e-18!12;UBERON:0007277!9.47e-18!12;UBERON:0004732!3.55e-16!13;UBERON:0002680!3.77e-13!9;UBERON:0001895!3.77e-13!9;UBERON:0010092!3.77e-13!9;UBERON:0002037!5.28e-12!6;UBERON:0006215!5.28e-12!6;UBERON:0000063!1.66e-09!97;UBERON:0000065!6.68e-09!53;UBERON:0008947!8.87e-09!38;UBERON:0003258!8.87e-09!38;UBERON:0001557!4.26e-08!19;UBERON:0000473!1.06e-07!8;UBERON:0001004!8.32e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.21e-34;9!UBERON:0001557;6.21e-34;9!UBERON:0000072;1.46e-09;37!UBERON:0000065;1.84e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.34e-34,9;UBERON:0001557,3.92e-15,19;UBERON:0008947,5.66e-10,38;UBERON:0003258,5.66e-10,38;UBERON:0000072,1.24e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.69716365721711,4.76840853070704,0,0,0,0,0,0,0,5.91534000199219,6.74338760312407,6.98931986662098,7.279402200338,7.62578054323422,6.64357733511071,5.25842101824641,4.90553662813365,3.07797725557112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,1.01950509218015,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.768760269460425,0.255225424989168,0.6069466851333,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,52.218113017736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53620382154229,2.23676107892416,1.00109485027145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,2.36387681767936,8.61858433103662,0,4.16699987839901,0,0,19.8356257212208,17.5821023290647,5.02430952221031,0.438770794307945,2.94133851501273,0,0,0,0,0,1.73835795075213,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,4.00896322603251,2.28525931422807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,3.60776206594782,4.45859223008163,0,0,0,0,0.284609546029793,0,2.2562765983567,0,1.65412492502765,0,0,4.06376591414158,4.89698424477443,3.12038736802195,0,0,0,0,0,0,3.51992488922645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0,0,0,0.258565912723101,0.92562821219883,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0.471162288750703,0,0,0,0.573409195690071,0.887432412294818,0.372578417648301,2.49027542885215,0,0,0,0,16.8600566090477,18.260049604964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.85262772618109,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63804924423206,0,0,0,0,0,0,0,0,0,1.40683808434017,0,0,7.863093949825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58013611732727,0.348724276104376,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,19.0154234056247,0,0,0,0,0,0,3.9769708788558,0,0.237840181555137,2.14597555874024,0.109940516745429,0.301925687133347,0,0,0,0,0,0.588925401344836,0,1.6906229103336,0,0,0,0,3.21397089490184,0,0,0,0,0,1.57771562193185,0,0,0,0,0,0,0,0,2.66066852124018,0.101988829741982,0.534434810531121,0.918948995348449,2.25636785363138,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22068853494722,0,0,0 | |||
|short_description=p2@TLX3 | |||
}} |
Revision as of 09:00, 22 January 2014
Short description: | p2@TLX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TLX3_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -49bp_to_ENST00000296921, NM_021025, uc003mbf.2_5end |
EntrezGene: | TLX3 |
HGNC: | 13532 |
UniProt: | O43711 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.18e-09 | 2 |
epithelial cell | 6.19e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.34e-34 | 9 |
upper respiratory tract | 3.92e-15 | 19 |
respiratory primordium | 5.66e-10 | 38 |
endoderm of foregut | 5.66e-10 | 38 |
segment of respiratory tract | 1.24e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.14e-23 | 143 |
carcinoma | 1.14e-22 | 106 |
cancer | 8.47e-21 | 235 |
disease of cellular proliferation | 3.69e-20 | 239 |
clear cell adenocarcinoma | 2.25e-08 | 2 |
mixed cell type cancer | 2.81e-08 | 2 |
carcinosarcoma | 2.81e-08 | 2 |
cervical cancer | 4.12e-07 | 5 |