FFCP PHASE1:Hg19::chr6:25006945..25006954,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1637 | |||
|description=CAGE_peak_at_chr6:25006945..25006954,- | |||
|id=chr6:25006945..25006954,- | |||
|ontology_enrichment_celltype=CL:0000860!5.41e-48!45;CL:0002057!3.69e-47!42;CL:0000766!8.23e-38!76;CL:0002194!3.03e-32!63;CL:0000576!3.03e-32!63;CL:0000040!3.03e-32!63;CL:0000559!3.03e-32!63;CL:0000839!1.85e-31!70;CL:0002009!4.09e-31!65;CL:0000557!5.97e-31!71;CL:0000738!2.78e-29!140;CL:0000763!2.89e-28!112;CL:0000049!2.89e-28!112;CL:0002032!1.03e-25!165;CL:0000837!1.03e-25!165;CL:0002031!9.24e-25!124;CL:0000037!2.15e-24!172;CL:0000566!2.15e-24!172;CL:0002087!5.75e-24!119;CL:0000988!1.11e-22!182;CL:0002393!1.12e-19!9;CL:0002397!1.12e-19!9;CL:0000767!1.31e-16!3;CL:0000134!6.41e-09!358;CL:0002320!1.30e-08!365;CL:0000219!1.56e-07!390;CL:0000034!3.74e-07!444;CL:0000048!6.39e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000767;4.01e-74;3!CL:0000094;2.07e-28;8!CL:0000081;6.76e-21;11!CL:0000236;1.22e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.75e-74,3;CL:0000094,1.80e-28,8;CL:0000081,6.11e-21,11;CL:0000766,2.64e-12,72;CL:0000738,1.45e-11,136;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177;CL:0000763,2.93e-08,108;CL:0000049,2.93e-08,108;CL:0000236,4.19e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.30e-27!80;UBERON:0002390!1.21e-26!102;UBERON:0003061!1.21e-26!102;UBERON:0001474!1.04e-24!86;UBERON:0002193!9.07e-24!112;UBERON:0004765!2.64e-20!101;UBERON:0001434!2.64e-20!101;UBERON:0002405!6.04e-19!115;UBERON:0002204!1.78e-11!167;UBERON:0003081!1.28e-09!216;UBERON:0002384!3.40e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,2.16742572642506,0,0,0,0,0,0,1.10799081706375,0,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0.236482229888585,2.06847408441971,0,1.35426486594342,0,0,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0.422510572623884,0.425208599930087,0.419317291016752,0,0.450530678524519,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,3.98449078376614,0,1.52909291250092,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:25006945..25006954,- | |||
}} |
Revision as of 10:30, 22 January 2014
Short description: | p@chr6:25006945..25006954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:25006945..25006954, - |
Coexpression cluster: | C1637_CD19_Basophils_CD14_CD14CD16_Peripheral_Mast_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.75e-74 | 3 |
granulocyte | 1.80e-28 | 8 |
blood cell | 6.11e-21 | 11 |
myeloid leukocyte | 2.64e-12 | 72 |
leukocyte | 1.45e-11 | 136 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
myeloid cell | 2.93e-08 | 108 |
common myeloid progenitor | 2.93e-08 | 108 |
B cell | 4.19e-08 | 14 |