FFCP PHASE1:Hg19::chr6:131624969..131624980,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr6:131624969..131624980,+ | |||
|id=chr6:131624969..131624980,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.49e-28!5;CL:0000540!5.64e-09!6;CL:0000031!5.64e-09!6;CL:0000404!5.64e-09!6;CL:0000039!3.01e-07!7;CL:0000586!3.01e-07!7;CL:0000047!7.90e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.28e-98;5!CL:0002321;3.58e-33;15!CL:0000540;4.58e-30;6!CL:0000404;4.58e-30;6!CL:0000148;1.32e-18;10!CL:0000147;1.71e-13;14!CL:0000710;1.23e-09;20!CL:0000075;2.74e-07;27!CL:0002319;3.37e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.46e-99,5;CL:0000540,5.07e-30,6;CL:0000031,5.07e-30,6;CL:0000404,5.07e-30,6;CL:0000047,1.01e-22,8;CL:0000148,1.21e-18,10;CL:0000541,1.21e-18,10;CL:0000147,1.60e-13,14;CL:0000133,1.22e-11,59;CL:0000710,1.17e-09,20;CL:0000221,1.41e-09,72;CL:0000075,2.66e-07,27;CL:0002319,3.44e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;4.58e-30;6!CL:0000133;3.21e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!3.84e-11!20;UBERON:0001869!4.57e-11!32;UBERON:0001893!2.37e-10!34;UBERON:0005743!3.17e-10!86;UBERON:0002619!4.25e-10!22;UBERON:0000073!5.43e-09!94;UBERON:0001016!5.43e-09!94;UBERON:0000956!7.81e-09!25;UBERON:0000203!7.81e-09!25;UBERON:0002791!1.88e-08!33;UBERON:0002780!2.19e-08!41;UBERON:0001890!2.19e-08!41;UBERON:0006240!2.19e-08!41;UBERON:0000200!3.07e-08!6;UBERON:0002020!3.53e-08!34;UBERON:0003528!3.53e-08!34;UBERON:0003080!3.71e-08!42;UBERON:0003056!5.08e-08!61;UBERON:0001017!7.25e-08!82;UBERON:0007029!7.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.33e-07;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51302712679503,1.32529768321485,2.44007280025989,2.48786532036889,4.54177531576131,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12527203925513,1.92555211236127,2.07720169014593,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,5.02621631032999,0,0.203977659483963,0.26721740526556,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr6:131624969..131624980,+ | |||
}} |
Revision as of 13:53, 22 January 2014
Short description: | p@chr6:131624969..131624980, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:131624969..131624980, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.46e-99 | 5 |
neuron | 5.07e-30 | 6 |
neuroblast | 5.07e-30 | 6 |
electrically signaling cell | 5.07e-30 | 6 |
neuronal stem cell | 1.01e-22 | 8 |
melanocyte | 1.21e-18 | 10 |
melanoblast | 1.21e-18 | 10 |
pigment cell | 1.60e-13 | 14 |
neurectodermal cell | 1.22e-11 | 59 |
neurecto-epithelial cell | 1.17e-09 | 20 |
ectodermal cell | 1.41e-09 | 72 |
columnar/cuboidal epithelial cell | 2.66e-07 | 27 |
neural cell | 3.44e-07 | 25 |