FFCP PHASE1:Hg19::chr6:133008487..133008499,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12705 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=17bp_to_uc003qdn.2_5end | |||
|coexpression_cluster_id=C2842 | |||
|description=CAGE_peak_3_at_VNN1_5end | |||
|id=chr6:133008487..133008499,- | |||
|ontology_enrichment_celltype=CL:0002619!1.30e-07!3;CL:0002621!1.70e-07!3;CL:0000066!3.00e-07!254;CL:0002166!5.35e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;3.35e-23;3!CL:0002621;9.75e-23;3!CL:0002166;2.87e-10;3!CL:1001319;2.55e-08;1!CL:1000600;2.55e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.36e-23,3;CL:0002621,8.75e-23,3;CL:0002166,4.39e-10,3;CL:1001319,2.84e-08,1;CL:1000600,2.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.55e-08;1 | |||
|ontology_enrichment_disease=DOID:2394!1.40e-12!14;DOID:193!2.31e-08!29;DOID:120!8.39e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.49e-12;14!DOID:5662;2.55e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.57e-12,14;DOID:5662,3.28e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000992!2.56e-08!13;UBERON:0005911!5.90e-08!82;UBERON:0001949!1.70e-07!3;UBERON:0003929!2.41e-07!54;UBERON:0002294!6.00e-07!7;UBERON:0001173!6.00e-07!7;UBERON:0004912!6.00e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.75e-23;3!UBERON:0003350;9.00e-15;8!UBERON:0002110;2.87e-10;3!UBERON:0003929;4.68e-10;7!UBERON:0000486;6.70e-10;12!UBERON:0001828;7.39e-09;8!UBERON:0004645;2.55e-08;1!UBERON:0001256;2.55e-08;1!UBERON:0001259;2.55e-08;1!UBERON:0001708;6.47e-08;4!UBERON:0008895;6.47e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,8.75e-23,3;UBERON:0003350,9.02e-15,8;UBERON:0002110,2.16e-10,3;UBERON:0006242,2.16e-10,3;UBERON:0001828,7.11e-09,8;UBERON:0004645,2.84e-08,1;UBERON:0001256,2.84e-08,1;UBERON:0001259,2.84e-08,1;UBERON:0001708,8.87e-08,4;UBERON:0008895,8.87e-08,4;UBERON:0002323,8.69e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,11.867520134716,8.42123531649347,7.21211589375722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933633106199299,0.404132016209064,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,4.63668405004419,5.44928731239107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,1.72351904261178,1.8720341211139,0.743155811443641,0.93733833986777,1.17587489739202,1.41775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,9.94749944296634,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99031692572366,1.75380354101505,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0.48111056362756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.391969589657511,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,1.60317640503067,1.92107695265417,0,0,0,0,4.17758914165634,0.372757606696298,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0.477890301491107,4.49803112163605,0.776314784381297,0,1.59505028734797,0,3.75644022493046,0.761610424337591,0.406870733204662,1.27294061441792,1.8259794697223,0,0.398095888698616,0,0,0,0,0,5.14659819299822,0,0.226705925512272,0,0,0,0,0.657852148736121,0.883445729729405,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,1.37190407549935,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0.870866991587845,0,0.0673520530145875,0.717222053926764,0,1.54666210360852,0.213454691755431,0,14.8211583475868,0,0,0,0,0,0 | |||
|short_description=p3@VNN1 | |||
}} |
Revision as of 13:56, 22 January 2014
Short description: | p3@VNN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VNN1_5end |
Coexpression cluster: | C2842_tubular_Mesothelial_CD14_giant_mesenchymal_mesothelioma_Gingival |
Association with transcript: | 17bp_to_uc003qdn.2_5end |
EntrezGene: | VNN1 |
HGNC: | 12705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.36e-23 | 3 |
gingival epithelial cell | 8.75e-23 | 3 |
epithelial cell of Malassez | 4.39e-10 | 3 |
bladder cell | 2.84e-08 | 1 |
lower urinary tract cell | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 8.75e-23 | 3 |
epithelium of mucosa | 9.02e-15 | 8 |
gallbladder | 2.16e-10 | 3 |
gall bladder primordium | 2.16e-10 | 3 |
gingiva | 7.11e-09 | 8 |
urinary bladder urothelium | 2.84e-08 | 1 |
wall of urinary bladder | 2.84e-08 | 1 |
mucosa of urinary bladder | 2.84e-08 | 1 |
jaw skeleton | 8.87e-08 | 4 |
splanchnocranium | 8.87e-08 | 4 |
body cavity | 8.69e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.57e-12 | 14 |
pleomorphic carcinoma | 3.28e-08 | 1 |