FFCP PHASE1:Hg19::chr7:53466339..53466356,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_at_chr7:53466339..53466356,- | |||
|id=chr7:53466339..53466356,- | |||
|ontology_enrichment_celltype=CL:0000239!1.92e-46!3;CL:1000615!1.92e-46!3;CL:0002306!1.92e-46!3;CL:1000507!5.40e-45!12;CL:1000494!5.40e-45!12;CL:1000497!9.09e-41!18;CL:0002518!9.09e-41!18;CL:1000449!9.48e-34!16;CL:0002681!3.60e-29!13;CL:0002584!3.60e-29!13 | |||
|ontology_enrichment_celltype_v019=CL:0000239;2.90e-38;3!CL:1000615;2.90e-38;3!CL:0002306;2.90e-38;3!CL:1000497;1.15e-15;17!CL:0002518;1.15e-15;17!CL:1000507;2.90e-12;10!CL:1000494;2.90e-12;10!CL:0002681;2.18e-10;12!CL:0002584;2.18e-10;12!CL:1000449;1.68e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.64e-38,3;CL:1000615,2.64e-38,3;CL:0002306,2.64e-38,3;CL:1000497,1.12e-15,17;CL:0002518,1.12e-15,17;CL:1000507,2.81e-12,10;CL:1000494,2.81e-12,10;CL:0002681,2.13e-10,12;CL:0002584,2.13e-10,12;CL:1000449,1.65e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.55e-26;10!UBERON:0007687;2.55e-26;10!UBERON:0003104;2.76e-09;31 | |||
|ontology_enrichment_disease=DOID:4468!5.49e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.74e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.74e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0006853!1.92e-46!3;UBERON:0007685!1.92e-46!3;UBERON:0004134!1.92e-46!3;UBERON:0009773!5.40e-45!12;UBERON:0001231!5.40e-45!12;UBERON:0004810!5.40e-45!12;UBERON:0002113!6.65e-45!27;UBERON:0003918!6.65e-45!27;UBERON:0005095!6.65e-45!27;UBERON:0007687!6.65e-45!27;UBERON:0000489!8.41e-38!32;UBERON:0004211!9.48e-34!16;UBERON:0001285!9.48e-34!16;UBERON:0007684!9.48e-34!16;UBERON:0003220!9.48e-34!16;UBERON:0004208!9.48e-34!16;UBERON:0006555!9.18e-32!17;UBERON:0005103!9.18e-32!17;UBERON:0000083!9.18e-32!17;UBERON:0009201!9.18e-32!17;UBERON:0004819!9.18e-32!17;UBERON:0006553!9.18e-32!17;UBERON:0003074!9.18e-32!17;UBERON:0003060!9.18e-32!17;UBERON:0000080!5.36e-30!18;UBERON:0002120!5.36e-30!18;UBERON:0004875!5.36e-30!18;UBERON:0005721!5.36e-30!18;UBERON:0005754!5.36e-30!18;UBERON:0007297!5.36e-30!18;UBERON:0001225!3.60e-29!13;UBERON:0008987!3.60e-29!13;UBERON:0006554!2.50e-27!44;UBERON:0004876!5.42e-27!20;UBERON:0001008!1.05e-26!45;UBERON:0003887!1.05e-25!21;UBERON:0001851!9.79e-24!16;UBERON:0000353!2.39e-22!17;UBERON:0005172!9.92e-22!55;UBERON:0005173!9.92e-22!55;UBERON:0000058!9.61e-21!26;UBERON:0002417!1.59e-19!61;UBERON:0000916!1.59e-19!61;UBERON:0003103!3.55e-17!69;UBERON:0003064!1.56e-14!37;UBERON:0005177!8.54e-11!107;UBERON:0009569!3.54e-10!113;UBERON:0003886!1.94e-08!63;UBERON:0002553!1.45e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.90e-38;3!UBERON:0007685;2.90e-38;3!UBERON:0004134;2.90e-38;3!UBERON:0002113;8.88e-30;24!UBERON:0011143;8.88e-30;24!UBERON:0000489;9.78e-25;29!UBERON:0006554;6.28e-24;30!UBERON:0001008;6.28e-24;30!UBERON:0004211;2.90e-12;10!UBERON:0009773;2.90e-12;10!UBERON:0001231;2.90e-12;10!UBERON:0004810;2.90e-12;10!UBERON:0001225;2.18e-10;12!UBERON:0008987;2.18e-10;12!UBERON:0005172;2.40e-09;52!UBERON:0005173;2.40e-09;52!UBERON:0001851;1.68e-08;15!UBERON:0006555;1.68e-08;15!UBERON:0000353;1.68e-08;15!UBERON:0004819;1.68e-08;15!UBERON:0001285;1.68e-08;15!UBERON:0007684;1.68e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.64e-38,3;UBERON:0007685,2.64e-38,3;UBERON:0004134,2.64e-38,3;UBERON:0002113,1.53e-27,26;UBERON:0003918,1.53e-27,26;UBERON:0011143,1.53e-27,26;UBERON:0005095,1.53e-27,26;UBERON:0007687,1.53e-27,26;UBERON:0000489,3.50e-23,31;UBERON:0006554,1.92e-15,47;UBERON:0001008,3.95e-15,48;UBERON:0005172,1.72e-13,54;UBERON:0005173,1.72e-13,54;UBERON:0004810,2.81e-12,10;UBERON:0002417,3.53e-12,60;UBERON:0000916,3.53e-12,60;UBERON:0003103,8.75e-11,68;UBERON:0001225,2.13e-10,12;UBERON:0008987,2.13e-10,12;UBERON:0001851,1.65e-08,15;UBERON:0004211,1.65e-08,15;UBERON:0009773,1.65e-08,15;UBERON:0000353,1.65e-08,15;UBERON:0001231,1.65e-08,15;UBERON:0001285,1.65e-08,15;UBERON:0007684,1.65e-08,15;UBERON:0004208,1.65e-08,15;UBERON:0006555,4.91e-08,16;UBERON:0004819,4.91e-08,16;UBERON:0005177,2.40e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,3.56826782263054,2.49322802678617,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9539933145885,6.03227763552478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39818978046554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:53466339..53466356,- | |||
}} |
Revision as of 17:03, 22 January 2014
Short description: | p@chr7:53466339..53466356, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:53466339..53466356, - |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.64e-38 | 3 |
kidney cortex tubule cell | 2.64e-38 | 3 |
epithelial cell of proximal tubule | 2.64e-38 | 3 |
kidney cell | 1.12e-15 | 17 |
kidney epithelial cell | 1.12e-15 | 17 |
kidney tubule cell | 2.81e-12 | 10 |
nephron tubule epithelial cell | 2.81e-12 | 10 |
kidney cortical cell | 2.13e-10 | 12 |
renal cortical epithelial cell | 2.13e-10 | 12 |
epithelial cell of nephron | 1.65e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.64e-38 | 3 |
region of nephron tubule | 2.64e-38 | 3 |
proximal tubule | 2.64e-38 | 3 |
kidney | 1.53e-27 | 26 |
kidney mesenchyme | 1.53e-27 | 26 |
upper urinary tract | 1.53e-27 | 26 |
kidney rudiment | 1.53e-27 | 26 |
kidney field | 1.53e-27 | 26 |
cavitated compound organ | 3.50e-23 | 31 |
urinary system structure | 1.92e-15 | 47 |
renal system | 3.95e-15 | 48 |
abdomen element | 1.72e-13 | 54 |
abdominal segment element | 1.72e-13 | 54 |
nephron tubule epithelium | 2.81e-12 | 10 |
abdominal segment of trunk | 3.53e-12 | 60 |
abdomen | 3.53e-12 | 60 |
compound organ | 8.75e-11 | 68 |
cortex of kidney | 2.13e-10 | 12 |
renal parenchyma | 2.13e-10 | 12 |
cortex | 1.65e-08 | 15 |
nephron epithelium | 1.65e-08 | 15 |
renal tubule | 1.65e-08 | 15 |
parenchyma | 1.65e-08 | 15 |
nephron tubule | 1.65e-08 | 15 |
nephron | 1.65e-08 | 15 |
uriniferous tubule | 1.65e-08 | 15 |
nephrogenic mesenchyme | 1.65e-08 | 15 |
excretory tube | 4.91e-08 | 16 |
kidney epithelium | 4.91e-08 | 16 |
trunk region element | 2.40e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.74e-15 | 2 |