FFCP PHASE1:Hg19::chr7:134654013..134654026,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1441 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-238bp_to_AJ223812_5end | |||
|description=CAGE_peak_55_at_CALD1_5end | |||
|id=chr7:134654013..134654026,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.02e-10!180;CL:0000057!1.02e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.50e-11;6!CL:0000098;1.50e-11;6!CL:0002167;1.50e-11;6!CL:0002615;2.53e-11;3!CL:0000511;3.72e-09;1!CL:0002625;3.72e-09;1!CL:0000216;3.72e-09;1!CL:0002581;1.17e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.59e-11,6;CL:0000098,1.59e-11,6;CL:0002167,1.59e-11,6;CL:0002615,2.81e-11,3;CL:0000511,3.87e-09,1;CL:0002625,3.87e-09,1;CL:0000216,3.87e-09,1;CL:0002581,7.75e-09,1;CL:0000136,3.80e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.17e-08;1!UBERON:0005754;1.17e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;4.88e-09;1!DOID:2513;1.17e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,4.19e-09,1;DOID:2513,6.16e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!2.08e-07!6;UBERON:0002358!2.08e-07!6;UBERON:0003684!2.08e-07!6;UBERON:0001178!2.08e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.05e-12;6!UBERON:0002358;3.05e-12;6!UBERON:0003684;3.05e-12;6!UBERON:0001178;3.05e-12;6!UBERON:0001136;3.72e-09;1!UBERON:0001343;3.72e-09;1!UBERON:0004910;3.72e-09;1!UBERON:0004813;3.72e-09;1!UBERON:0000998;1.17e-08;1!UBERON:0001736;1.17e-08;1!UBERON:0006868;1.17e-08;1!UBERON:0005904;1.71e-08;4!UBERON:0004457;2.56e-08;9!UBERON:0000042;2.56e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.24e-12,6;UBERON:0002358,3.24e-12,6;UBERON:0003684,3.24e-12,6;UBERON:0001178,3.24e-12,6;UBERON:0001136,3.87e-09,1;UBERON:0001343,3.87e-09,1;UBERON:0004910,3.87e-09,1;UBERON:0005154,3.87e-09,1;UBERON:0005295,3.87e-09,1;UBERON:0004813,3.87e-09,1;UBERON:0005297,3.87e-09,1;UBERON:0005294,3.87e-09,1;UBERON:0010141,3.87e-09,1;UBERON:0005891,3.87e-09,1;UBERON:0000998,6.65e-09,1;UBERON:0006868,6.65e-09,1;UBERON:0001736,9.74e-09,1;UBERON:0006298,9.74e-09,1;UBERON:0005904,1.32e-08,4 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.986680828671798,4.00293193412522,2.23480547213644,0,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,2.41077811209591,0,0.487932798790507,0,0,0.313454721478088,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,2.98183171017191,0.25326102332916,0.926864265692532,0.860509862246441,0.354668382198357,0,0,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,1.23633464639278,0,0,0,0,0,0.438977620880838,0.612975591598039,0.751190294532984,0.340296549480063,0.89694817844431,0.427114777637135,0.211931901159562,0,0.515262646192195,2.57640540045629,0.37223371266318,0,0.0974370051611986,1.00973509697646,0.184099797284599,0.323292113637624,0.355009592516614,0.302256294682921,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0,0.116193942869518,0,0,0,0,5.78916844373597,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.258543431515556,0,0.845302752556,1.59562869950922,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.24782516918484,1.24900292158013,1.41932173530541,0.702848489956279,0,2.27407504055985,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0.604780586659361,0,1.38115775959256,0.561320188866147,0.512556597022804,0.511707249066704,3.21707842287215,1.48418066444991,0.154209693802656,0,0,0.519254429183621,0.232420756919918,0,0,0.368323955743585,0.114814448164607,0.182091168006717,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0.464845549297286,0.62962469366128,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,1.2655176988749,0.571890581771475,0,0.42793898803392,0.318203247925937,0,0.719489830333259,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,1.31535265576129,0,0,0.405820753925408,0,0,0.143411352204052,0.196498082026242,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,1.86623752597084,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0.235265819698172,0,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0,0.453692771289717,0.15543720058278,0.443565449968902,0.318593534327405,0,0,0,0.53168342911599,0.521745061811734,0.601030435988874,0.380805212168795,0,0.727394636810238,0,0,0.398095888698616,0.800055529326307,1.03018711554838,0.336749488765919,0,0,0.214441591374926,0,0.453411851024545,1.15761237161917,0,0,0,0.438568099157414,0,0,0,0,0.690860683462397,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.451261970095544,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0.067969732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| |||
|short_description=p55@CALD1 | |||
}} |
Revision as of 19:28, 22 January 2014
Short description: | p55@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_55_at_CALD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -238bp_to_AJ223812_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.59e-11 | 6 |
sensory epithelial cell | 1.59e-11 | 6 |
olfactory epithelial cell | 1.59e-11 | 6 |
adipocyte of omentum tissue | 2.81e-11 | 3 |
androgen binding protein secreting cell | 3.87e-09 | 1 |
seminiferous tubule epithelial cell | 3.87e-09 | 1 |
Sertoli cell | 3.87e-09 | 1 |
perirenal preadipocyte | 7.75e-09 | 1 |
fat cell | 3.80e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.24e-12 | 6 |
peritoneum | 3.24e-12 | 6 |
abdominal cavity | 3.24e-12 | 6 |
visceral peritoneum | 3.24e-12 | 6 |
mesothelium | 3.87e-09 | 1 |
seminiferous tubule of testis | 3.87e-09 | 1 |
epithelium of male gonad | 3.87e-09 | 1 |
epithelial cord | 3.87e-09 | 1 |
sex cord | 3.87e-09 | 1 |
seminiferous tubule epithelium | 3.87e-09 | 1 |
testis sex cord | 3.87e-09 | 1 |
genital ridge | 3.87e-09 | 1 |
primitive sex cord of indifferent gonad | 3.87e-09 | 1 |
coelomic epithelium | 3.87e-09 | 1 |
seminal vesicle | 6.65e-09 | 1 |
seminal fluid secreting gland | 6.65e-09 | 1 |
submandibular gland | 9.74e-09 | 1 |
submandibular gland primordium | 9.74e-09 | 1 |
duct of male reproductive system | 1.32e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 4.19e-09 | 1 |
basal cell carcinoma | 6.16e-09 | 1 |