FFCP PHASE1:Hg19::chr8:32585547..32585563,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=3084 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7997 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=80bp_to_uc003xiz.1,uc003xja.2_5end | |||
|description=CAGE_peak_22_at_NRG1_5end | |||
|id=chr8:32585547..32585563,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;8.98e-23;3!CL:0000319;2.66e-18;1!CL:0000312;3.15e-14;5!CL:0000240;5.08e-12;6!CL:0000311;5.08e-12;6!CL:0000079;5.08e-12;6!CL:0000237;5.08e-12;6!CL:0000128;2.46e-10;7!CL:0000126;2.46e-10;7!CL:0000127;2.46e-10;7!CL:0000159;7.98e-10;2!CL:0000362;2.55e-08;9!CL:0002539;1.67e-07;10!CL:0002580;9.11e-07;3!CL:0002582;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.00e-22,3;CL:0000319,2.66e-18,1;CL:0000312,3.60e-14,5;CL:0000240,5.68e-12,6;CL:0000311,5.68e-12,6;CL:0000079,5.68e-12,6;CL:0000237,5.68e-12,6;CL:0000036,5.68e-12,6;CL:0000357,5.68e-12,6;CL:0000114,5.68e-12,6;CL:0000128,2.58e-10,7;CL:0000126,2.58e-10,7;CL:0000127,2.58e-10,7;CL:0002453,2.58e-10,7;CL:0000159,7.98e-10,2;CL:0000362,2.75e-08,9;CL:0002539,1.42e-07,10;CL:0002580,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.08e-12;6!CL:0000114;5.08e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.66e-18;1!DOID:0060084;6.14e-07;3!DOID:127;6.14e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.66e-18,1;DOID:0060084,6.14e-07,3;DOID:127,6.14e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.67e-07;10!UBERON:0004695;1.67e-07;10!UBERON:0002111;1.67e-07;10!UBERON:0004178;1.67e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.42e-07,10;UBERON:0004695,1.42e-07,10;UBERON:0002111,1.42e-07,10;UBERON:0004178,1.42e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,0,0,0,0.85870796139317,1.09499540058307,1.12988375635323,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0.22465726229299,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.825354125820202,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.368502951935304,0,0,0.741800787835671,0,0,0,0,0.277064115484183,0,0.612975591598039,0.150238058906597,0,0,0.427114777637135,0.635795703478686,0.600182192168805,0.309157587715317,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,0,2.01057944823262,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0.570762456703795,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.895585227028483,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,2.55175500661265,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0.460385919864187,1.12264037773229,0,0,0,0,0.616838775210622,0,0,1.03850885836724,0.232420756919918,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0.165284915360978,2.69066094311149,0,0.10115778085555,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0.707027159768564,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0.568272293612826,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.398495976502139,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.174118413160805,0,0.51595809741485,0,0,0,0,0.264768380074501,0,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.209205692624666,0.305994652908965,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,4.24563568142232,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.624902039810533,0,0,0,0,0,0.149254802886874,0.467426619694449,0.554805861502613,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0.727394636810238,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0.453411851024545,0.463044948647668,0,0.179088841081487,0,0,0.530067437837643,0,0.168942440653073,0,0.345430341731199,0.303859956177382,0,0,0,0.163565394255844,0,5.40700399258183,0,0,0,0,0,0,0.139879507719444,0,0,0.215649622793364,0.157265941855896,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0.550285795565037,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0.432626562123789,0,0,0.633492505057185,0,0,0.0918948995348449,0,0.227336094654718,0,0,0,0,0,0,0,0.448527450322454,0.0636471582781649,0,0.217716747896961,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p22@NRG1 | |||
}} |
Revision as of 21:36, 22 January 2014
Short description: | p22@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_22_at_NRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 80bp_to_uc003xiz.1, uc003xja.2_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.00e-22 | 3 |
mucus secreting cell | 2.66e-18 | 1 |
keratinocyte | 3.60e-14 | 5 |
stratified squamous epithelial cell | 5.68e-12 | 6 |
keratin accumulating cell | 5.68e-12 | 6 |
stratified epithelial cell | 5.68e-12 | 6 |
keratinizing barrier epithelial cell | 5.68e-12 | 6 |
epithelial fate stem cell | 5.68e-12 | 6 |
stratified epithelial stem cell | 5.68e-12 | 6 |
surface ectodermal cell | 5.68e-12 | 6 |
oligodendrocyte | 2.58e-10 | 7 |
macroglial cell | 2.58e-10 | 7 |
astrocyte | 2.58e-10 | 7 |
oligodendrocyte precursor cell | 2.58e-10 | 7 |
seromucus secreting cell | 7.98e-10 | 2 |
epidermal cell | 2.75e-08 | 9 |
aortic smooth muscle cell | 1.42e-07 | 10 |
preadipocyte of the breast | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 1.42e-07 | 10 |
arterial system smooth muscle | 1.42e-07 | 10 |
artery smooth muscle tissue | 1.42e-07 | 10 |
aorta smooth muscle tissue | 1.42e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.66e-18 | 1 |
cell type benign neoplasm | 6.14e-07 | 3 |
leiomyoma | 6.14e-07 | 3 |