FFCP PHASE1:Hg19::chr8:74206886..74206890,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19975 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IZV5 | |||
|association_with_transcript=39bp_to_ENST00000240285_5end | |||
|description=CAGE_peak_14_at_RDH10_5end | |||
|id=chr8:74206886..74206890,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000159;1.39e-27;2!CL:0000313;6.65e-15;1!CL:0002127;1.72e-14;1!CL:0000911;1.72e-14;1!CL:0002616;1.72e-14;1!CL:0000319;1.72e-14;1!CL:0000814;1.72e-14;1!CL:0002593;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,1.07e-27,2;CL:0000313,7.13e-15,1;CL:0002616,1.07e-14,1;CL:0000319,1.23e-14,1;CL:0002127,2.11e-14,1;CL:0000914,2.11e-14,1;CL:0000911,2.11e-14,1;CL:0000814,2.11e-14,1;CL:0002042,2.11e-14,1;CL:0002039,2.11e-14,1;CL:0002040,2.11e-14,1;CL:0002041,2.11e-14,1;CL:0000893,7.52e-08,2;CL:0002489,7.52e-08,2;CL:0000809,7.52e-08,2;CL:0000808,7.52e-08,2;CL:0000894,7.52e-08,2;CL:0000806,7.52e-08,2;CL:0000807,7.52e-08,2;CL:0000805,7.52e-08,2;CL:0002425,7.52e-08,2;CL:0002593,8.60e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;6.80e-08;2 | |||
|ontology_enrichment_disease=DOID:14566!5.22e-11!239;DOID:162!9.35e-11!235;DOID:0050687!1.10e-09!143;DOID:305!2.64e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3371;4.72e-15;1!DOID:4549;4.72e-15;1!DOID:5861;4.72e-15;1!DOID:6496;4.72e-15;1!DOID:2152;6.65e-15;1!DOID:3030;1.72e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.73e-15,1;DOID:4549,4.73e-15,1;DOID:5861,4.73e-15,1;DOID:6496,4.73e-15,1;DOID:2152,7.13e-15,1;DOID:3030,1.23e-14,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;6.65e-15;1!UBERON:0004909;4.23e-08;2!UBERON:0001905;6.80e-08;2!UBERON:0002757;6.80e-08;2!UBERON:0010134;6.80e-08;2!UBERON:0005408;6.80e-08;2!UBERON:0005406;6.80e-08;2!UBERON:0002456;6.80e-08;2!UBERON:0001899;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,7.13e-15,1;UBERON:0004909,4.38e-08,2;UBERON:0005406,5.37e-08,2;UBERON:0001905,8.04e-08,2;UBERON:0002757,8.04e-08,2;UBERON:0010134,8.04e-08,2;UBERON:0005408,8.04e-08,2;UBERON:0001899,8.04e-08,2;UBERON:0002456,8.60e-08,2 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,1.0007329835313,0,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.413303124703062,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0.640672166455702,0.423863802319124,0.600182192168805,0.206105058476878,0,0,0,0.292311015483596,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.337169380156203,0,0,0,0.71181185733329,0.134831308160164,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.799783929456456,0,0.502257091432126,0,0,0,0,0,0,0,1.12085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.178428988797162,0.946214490203608,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0.896974044789907,0,0.160853921143607,0,0,0,0,0,0.232420756919918,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,0.103041011647722,0,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.242721043499027,0.111443384277478,0.284136146806413,0,2.07875276582847,0,0,0,0.445234820091624,0.16480387422676,1.26675244876796,0,0,0.251932747854276,0.102268682502155,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.975966209950223,0,0.455768223388005,0.46112780877612,0.179515288819544,0,0,0.274792780205587,0,0,0.31396051279005,0,0,0.19606253431774,0.167821586975843,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0.330991955875499,0.627865836814451,2.38944859545918,0,0.138674673013139,0,0,0.261177619741208,0,0.343972064943233,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,5.29536760149002,0.90392296312213,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0.114536596165916,0.343189995723929,0.14405479798815,0.372757606696298,0,0,0,0.509991088181609,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0,0.13480708770837,0.492137407573744,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.157363764404994,0.211200673038813,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0.246277562248017,0,0,0.439656701034247,0,0,0,0.513260513652988,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0.655745261419609,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0.449803112163605,0.465788870628778,0.414706207840855,0.265841714557995,0,0.601030435988874,0.761610424337591,0,0,0.322231671127465,0.464033759878494,0.398095888698616,0,0,0,0,0,0.643324774124777,0,0,0.694567422971502,0,0.179088841081487,2.77921302444875,0.877136198314828,0.530067437837643,1.3503982678964,0.168942440653073,0,0,0,0,0,0,0,0.655219697692825,1.47463745252232,0,0,0,0,0,0.184105950251841,0.279759015438889,0,0,0,0,0,0,0.212574920101683,0,0,0,0.157723490002507,0,0,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0.175871244359621,0.255524855279191,1.07140367175657,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0.222462803784138,0,0,0.280272163313789,0,0.431855182437243,0,1.85839014859306,0,0.348724276104376,0,0.801711364730253,0,0,0,0,0.118332000730565,0,0,0,0,0,2.12525320415805,0.098150233615243,0.121917924982269,0,0,0,0,0,0.795803100645473,0.118920090777569,0.11294608203896,0,0.301925687133347,0.154348316215889,0,0.470317296361523,0.245148321753905,0,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| |||
|short_description=p14@RDH10 | |||
}} |
Revision as of 22:32, 22 January 2014
Short description: | p14@RDH10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RDH10_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000240285_5end |
EntrezGene: | RDH10 |
HGNC: | 19975 |
UniProt: | Q8IZV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 1.07e-27 | 2 |
serous secreting cell | 7.13e-15 | 1 |
perirenal adipocyte cell | 1.07e-14 | 1 |
mucus secreting cell | 1.23e-14 | 1 |
innate effector T cell | 2.11e-14 | 1 |
immature NK T cell | 2.11e-14 | 1 |
effector T cell | 2.11e-14 | 1 |
mature NK T cell | 2.11e-14 | 1 |
immature NK T cell stage IV | 2.11e-14 | 1 |
immature NK T cell stage I | 2.11e-14 | 1 |
immature NK T cell stage II | 2.11e-14 | 1 |
immature NK T cell stage III | 2.11e-14 | 1 |
thymocyte | 7.52e-08 | 2 |
double negative thymocyte | 7.52e-08 | 2 |
double-positive, alpha-beta thymocyte | 7.52e-08 | 2 |
DN4 thymocyte | 7.52e-08 | 2 |
DN1 thymic pro-T cell | 7.52e-08 | 2 |
DN2 thymocyte | 7.52e-08 | 2 |
DN3 thymocyte | 7.52e-08 | 2 |
immature single positive thymocyte | 7.52e-08 | 2 |
early T lineage precursor | 7.52e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 7.13e-15 | 1 |
epithelium of gonad | 4.38e-08 | 2 |
perirenal fat | 5.37e-08 | 2 |
pineal body | 8.04e-08 | 2 |
regional part of epithalamus | 8.04e-08 | 2 |
secretory circumventricular organ | 8.04e-08 | 2 |
circumventricular organ | 8.04e-08 | 2 |
epithalamus | 8.04e-08 | 2 |
internal thoracic artery | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.73e-15 | 1 |
extraosseous chondrosarcoma | 4.73e-15 | 1 |
myxoid chondrosarcoma | 4.73e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 4.73e-15 | 1 |
ovary epithelial cancer | 7.13e-15 | 1 |
mucinous adenocarcinoma | 1.23e-14 | 1 |